RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 CD3EAPO15446 510 aaKnown RBP17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SOD2P04179 222 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CCDC166P0CW27 439 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 HMGA1P17096 107 aaKnown RBP17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 GMPRP36959 345 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CSHL1Q14406 222 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PTAR1Q7Z6K3 402 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 LSMEM2Q8N112 164 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 KDM1BQ8NB78 822 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 OR4L1Q8NH43 312 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CEP70Q8NHQ1 597 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 WDR60Q8WVS4 1066 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 C19orf43Q9BQ61 176 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 NLE1Q9NVX2 485 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 HACD3Q9P035 362 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 BCAP29Q9UHQ4 241 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 INSIG1O15503 277 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 COCHO43405 550 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 DCXO43602 365 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CHRNGP07510 517 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 IMPDH1P20839 514 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CD9P21926 228 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 MPSTP25325 297 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SLC6A4P31645 630 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 RFC2P35250 354 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PPARGP37231 505 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 IRX1P78414 480 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 IHHQ14623 411 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 RCN1Q15293 331 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TAF1AQ15573 450 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TYSND1Q2T9J0 566 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 VWA5B1Q5TIE3 1220 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 C16orf89Q6UX73 402 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TMEM173Q86WV6 379 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 MYLK4Q86YV6 388 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 RHEBL1Q8TAI7 183 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 L3HYPDHQ96EM0 354 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SERPINI1Q99574 410 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ADGRE3Q9BY15 652 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 POMKQ9H5K3 350 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SYTL2Q9HCH5 934 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ZDHHC2Q9UIJ5 367 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 VPS28Q9UK41 221 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SSX2IPQ9Y2D8 614 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 STC2O76061 302 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CR2P20023 1033 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 FDXRP22570 491 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 DSG1Q02413 1049 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TAF11Q15544 211 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TAF12Q16514 161 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 LSM12Q3MHD2 195 aaKnown RBP17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 INO80DQ53TQ3 878 aaPredicted RBP17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 RBM20Q5T481 1227 aaKnown RBP17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 C1orf53Q5VUE5 145 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 C1orf146Q5VVC0 180 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CNKSR3Q6P9H4 555 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 MAPK15Q8TD08 544 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 BCL7CQ8WUZ0 217 aaPredicted RBP17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 USP13Q92995 863 aaPredicted RBP17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 NAF1Q96HR8 494 aaKnown RBP17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TBATAQ96M53 351 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 OLFM1Q99784 485 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CLSTN3Q9BQT9 956 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 KLF16Q9BXK1 252 aaPredicted RBP17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CATSPERZQ9NTU4 200 aa17.77■□□□□ 0.44
HLA-DQB1-204ENST00000399084 C2orf81A6NN90 581 aa17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 LIN7AO14910 233 aaPredicted RBP17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 RHOCP08134 193 aa17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ACADSP16219 412 aa17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ATP6V1C1P21283 382 aa17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ARSDP51689 593 aa17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 RAB33AQ14088 237 aa17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 PABPC1LQ4VXU2 614 aaKnown RBP17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 AFTPHQ6ULP2 937 aa17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 RIPOR1Q6ZS17 1223 aa17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 CIR1Q86X95 450 aaPredicted RBP17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 DENND1CQ8IV53 801 aa17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 CCNYL1Q8N7R7 359 aa17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 TXNDC5Q8NBS9 432 aaKnown RBP17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ZNF296Q8WUU4 475 aaPredicted RBP17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ZNF385DQ9H6B1 395 aa17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 YY1AP1Q9H869 796 aa17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 MYLKQ15746 1914 aa17.76■□□□□ 0.43
HLA-DQB1-204ENST00000399084 E9PBE3 544 aa17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 MUSKO15146 869 aa17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 KLHL41O60662 606 aa17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 PQBP1O60828 265 aaKnown RBP17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 SMIM24O75264 130 aa17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ELF1P32519 619 aa17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 STC1P52823 247 aa17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 ZNF460Q14592 562 aa17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 FBXO27Q8NI29 283 aa17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 BLOC1S5Q8TDH9 187 aa17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 CDKN2AIPNLQ96HQ2 116 aa17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 OR52B2Q96RD2 323 aa17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 HERC2P3Q9BVR0 1158 aa17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 TFB2MQ9H5Q4 396 aaKnown RBP17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 TMCO1Q9UM00 188 aa17.75■□□□□ 0.43
HLA-DQB1-204ENST00000399084 COMMD10Q9Y6G5 202 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms