RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SPOCK2Q92563 424 aa14.16□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ALG3Q92685 438 aa14.16□□□□□ -0.14
HLA-DQB1-202ENST00000399079 RBM41Q96IZ5 413 aaKnown RBP14.16□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CALR3Q96L12 384 aaKnown RBP14.16□□□□□ -0.14
HLA-DQB1-202ENST00000399079 SMIM14Q96QK8 99 aa14.16□□□□□ -0.14
HLA-DQB1-202ENST00000399079 IL12RB2Q99665 862 aa14.16□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ERVMER34-1Q9H9K5 563 aa14.16□□□□□ -0.14
HLA-DQB1-202ENST00000399079 B4GALT6Q9UBX8 382 aa14.16□□□□□ -0.14
HLA-DQB1-202ENST00000399079 AMACRQ9UHK6 382 aa14.16□□□□□ -0.14
HLA-DQB1-202ENST00000399079 PCDHGB2Q9Y5G2 931 aa14.16□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CCDC66A2RUB6 948 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 PPP1R12AO14974 1030 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 FLRT2O43155 660 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 LZTS3O60299 673 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 FTCDO95954 541 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ADRB1P08588 477 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CTPS1P17812 591 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 TGM2P21980 687 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CTNNA2P26232 953 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 EPHA8P29322 1005 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 NR2C2P49116 596 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 IFI35P80217 286 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 SUZ12Q15022 739 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 IRF4Q15306 451 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 TRIP6Q15654 476 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 WSCD2Q2TBF2 565 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ARMC12Q5T9G4 340 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 DPPA4Q7L190 304 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ZC3H18Q86VM9 953 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 LRRC8AQ8IWT6 810 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 DENND6BQ8NEG7 585 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 P3H4Q92791 437 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 AGAP3Q96P47 875 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 GRPEL1Q9HAV7 217 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 GPR27Q9NS67 375 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 PHTF1Q9UMS5 762 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CAPN6Q9Y6Q1 641 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ASPMQ8IZT6 3477 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 SPTY2D1-AS1A0A0U1RR47 76 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 NPIPB15A6NHN6 443 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ARHGAP6O43182 974 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 FZD6O60353 706 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 RECQL5O94762 991 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ITGAVP06756 1048 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 MMP2P08253 660 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ALPIP09923 528 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ELFN1P0C7U0 828 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 PYGMP11217 842 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 GM2AP17900 193 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CD86P42081 329 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 RABIFP47224 123 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 RXRGP48443 463 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 RWDD2BP57060 319 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 PFN3P60673 137 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 PDE1CQ14123 709 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 FZD2Q14332 565 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 LRRC14Q15048 493 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 PPP2R5EQ16537 467 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 DENND2CQ68D51 928 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 PEX26Q7Z412 305 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 TXLNBQ8N3L3 684 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 PIH1D2Q8WWB5 315 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 AMFRQ9UKV5 643 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 GUCA1BQ9UMX6 200 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CHKBQ9Y259 395 aa14.15□□□□□ -0.14
HLA-DQB1-202ENST00000399079 LRRK1Q38SD2 2015 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 A0A1W2PQ67 120 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 PRLP01236 227 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 LHCGRP22888 699 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 CES1P23141 567 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 GRK6P43250 576 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 FOXK2Q01167 660 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 INPP5AQ14642 412 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 ACOX1Q15067 660 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 PRKD1Q15139 912 aaPredicted RBP14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 CNGA3Q16281 694 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 BBS12Q6ZW61 710 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 BZW1Q7L1Q6 419 aaKnown RBP14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TSPAN33Q86UF1 283 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 OXR1Q8N573 874 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 PLA2G15Q8NCC3 412 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 BAHD1Q8TBE0 780 aaPredicted RBP14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 FAM174AQ8TBP5 190 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TFB1MQ8WVM0 346 aaKnown RBP14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 SCRN2Q96FV2 425 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 RBM15Q96T37 977 aaKnown RBP eCLIP14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 C1QTNF7Q9BXJ2 289 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TDRD1Q9BXT4 1180 aaKnown RBP14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 OSBPL8Q9BZF1 889 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 BRD8Q9H0E9 1235 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 C10orf88Q9H8K7 445 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 UCKL1Q9NWZ5 548 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 DNAJC28Q9NX36 388 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 KLF15Q9UIH9 416 aa14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 PNMA8BQ9ULN7 279 aaPredicted RBP14.14□□□□□ -0.15
HLA-DQB1-202ENST00000399079 GOLGA6L3A6NEY3 463 aa14.13□□□□□ -0.15
HLA-DQB1-202ENST00000399079 PCCBP05166 539 aa14.13□□□□□ -0.15
HLA-DQB1-202ENST00000399079 PTPN3P26045 913 aa14.13□□□□□ -0.15
HLA-DQB1-202ENST00000399079 VIPR1P32241 457 aa14.13□□□□□ -0.15
HLA-DQB1-202ENST00000399079 HNF1BP35680 557 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms