RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ACTRT2Q8TDY3 377 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 ACAT2Q9BWD1 397 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 GALNT8Q9NY28 637 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 ASTN1O14525 1302 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 PEX11AO75192 247 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 FTH1P02794 183 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 SULT2A1Q06520 285 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 INTS6LQ5JSJ4 861 aaKnown RBP14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 TMC5Q6UXY8 1006 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 OTOP3Q7RTS5 596 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 SLITRK2Q9H156 845 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 KIAA1522Q9P206 1035 aaPredicted RBP14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 MSI1O43347 362 aaKnown RBP14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 VPS4BO75351 444 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 FSBPO95073 299 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 ATP6V1G2O95670 118 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 ITGAXP20702 1163 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 IFNGR2P38484 337 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 VARS2Q5ST30 1063 aaKnown RBP14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 CHST9Q7L1S5 443 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 ZNF605Q86T29 641 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 OR6Y1Q8NGX8 325 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 MIEF2Q96C03 454 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 KLHL25Q9H0H3 589 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 TKTP29401 623 aaKnown RBP14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 ILF2Q12905 390 aaKnown RBP14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 MAMLD1Q13495 774 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 OR5B17Q8NGF7 314 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 CYLDQ9NQC7 956 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 BTRCQ9Y297 605 aa14.3□□□□□ -0.12
PCDHA11-201ENST00000398640 PER2O15055 1255 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 GRM6O15303 877 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 NRIP1P48552 1158 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 TAF10Q12962 218 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 MPPE1Q53F39 396 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 TMC3Q7Z5M5 1100 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 C19orf60Q96EN9 201 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 QRFPRQ96P65 431 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 VAT1Q99536 393 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 APOL4Q9BPW4 351 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 DCLRE1BQ9H816 532 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 POLR1BQ9H9Y6 1135 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 AGO1Q9UL18 857 aaKnown RBP14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 SNX6Q9UNH7 406 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 CHKBQ9Y259 395 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 PCDHA11Q9Y5I1 949 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 LRPAP1P30533 357 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 PIK3CGP48736 1102 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 MAPK11Q15759 364 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 PHYKPLQ8IUZ5 450 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 GPR135Q8IZ08 494 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 ZNF75CPQ92670 426 aaPredicted RBP14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 CAVIN3Q969G5 261 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 RAD9AQ99638 391 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 ANAPC2Q9UJX6 822 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 BCLAF3A2AJT9 711 aaKnown RBP14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 URADA6NGE7 173 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 KIF1CO43896 1103 aaKnown RBP14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 LTA4HP09960 611 aaKnown RBP14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 FUT2Q10981 343 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 ATP13A4Q4VNC1 1196 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 XKR6Q5GH73 641 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 SNRNP25Q9BV90 132 aaKnown RBP14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 MCOLN1Q9GZU1 580 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 IL22Q9GZX6 179 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 B4GALT4O60513 344 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 MAPK8P45983 427 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 ARMC4Q5T2S8 1044 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 PTGR2Q8N8N7 351 aaPredicted RBP14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 ELOVL2Q9NXB9 296 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 PSME2Q9UL46 239 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 ARIH1Q9Y4X5 557 aaPredicted RBP14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 IGLV3-22A0A075B6J6 115 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 AVILO75366 819 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 CFIP05156 583 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 GOT1P17174 413 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 RPL17P18621 184 aaKnown RBP14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 HYIQ5T013 277 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 UNC5AQ6ZN44 842 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 ADGRG2Q8IZP9 1017 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 SIKE1Q9BRV8 207 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 BTBD10Q9BSF8 475 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 ZNF232Q9UNY5 417 aa14.29□□□□□ -0.12
PCDHA11-201ENST00000398640 SIGLEC16A6NMB1 481 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 H3BMM5 538 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 CLOCKO15516 846 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 SHBGP04278 402 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 FAM58BPP0C7Q3 252 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 TCEA1P23193 301 aaKnown RBP14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 CXCR2P25025 360 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 JAG1P78504 1218 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 MTAPQ13126 283 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 CBX2Q14781 532 aaPredicted RBP14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 ST13P5Q8NFI4 369 aaPredicted RBP14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 BSNDQ8WZ55 320 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 FAM84AQ96KN4 292 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 CNPPD1Q9BV87 410 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 GPR88Q9GZN0 384 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms