RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 GUCA1CO95843 209 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 CKBP12277 381 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 CYBAP13498 195 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 CTPS1P17812 591 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 RPL34P49207 117 aaKnown RBP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 CCNHP51946 323 aaPredicted RBP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 OXCT1P55809 520 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 PLD1Q13393 1074 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 SFT2D3Q587I9 215 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 IRGCQ6NXR0 463 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 GLT6D1Q7Z4J2 308 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 ST13P4Q8IZP2 240 aaPredicted RBP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 CD99L2Q8TCZ2 262 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 SIKE1Q9BRV8 207 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 EGFL7Q9UHF1 273 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 RAD54BQ9Y620 910 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 SLC4A7Q9Y6M7 1214 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 MYOCOSA0A1B0GUC4 107 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 H0Y626 953 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 RHOCP08134 193 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 RBP1P09455 135 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 CES1P23141 567 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 ME2P23368 584 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 CLLU1OSQ5K130 101 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 RARS2Q5T160 578 aaKnown RBP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 PAOXQ6QHF9 649 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 CYS1Q717R9 158 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 KCNA7Q96RP8 456 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 TUBGCP5Q96RT8 1024 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 TSPAN18Q96SJ8 248 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 APOL5Q9BWW9 433 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 PRKD2Q9BZL6 878 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 PIDD1Q9HB75 910 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 CD274Q9NZQ7 290 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 SF3B1O75533 1304 aaKnown RBP eCLIP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 CCDC162PA2VCL2 907 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 MOXD2PA6NHM9 499 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 A8MT66 165 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 BTN3A1O00481 513 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 PRRG1O14668 218 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 STX7O15400 261 aaKnown RBP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 CD3EAPO15446 510 aaKnown RBP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 IPO13O94829 963 aaKnown RBP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 ALDH1A3P47895 512 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 ALDH7A1P49419 539 aaKnown RBP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 POU4F1Q01851 419 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 ZNF177Q13360 481 aaPredicted RBP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 CCNIQ14094 377 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 RNF19BQ6ZMZ0 732 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 BHLHA9Q7RTU4 235 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 TMCO2Q7Z6W1 182 aaPredicted RBP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 SPDYE1Q8NFV5 336 aaPredicted RBP10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 C1orf50Q9BV19 199 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 PCDHB8Q9UN66 801 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 TRAF6Q9Y4K3 522 aa10.48□□□□□ -0.73
CPSF1P1-201ENST00000397477 F8W8V4 182 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 KIF3CO14782 793 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 MRASO14807 208 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 H2AFYO75367 372 aaKnown RBP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 MYL4P12829 197 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 RHOQP17081 205 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 CDKN2DP55273 166 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 PSME3P61289 254 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 FOXD4Q12950 439 aaPredicted RBP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 TUBB3Q13509 450 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 HNRNPDQ14103 355 aaKnown RBP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 CAPRIN1Q14444 709 aaKnown RBP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 PTPRNQ16849 979 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 FRA10AC1Q70Z53 315 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 PIWIL4Q7Z3Z4 852 aaKnown RBP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 MAB21L3Q8N8X9 362 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 STYXQ8WUJ0 223 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 BTN2A3PQ96KV6 586 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 CSNK1G1Q9HCP0 422 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 SCUBE2Q9NQ36 999 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 BCAP29Q9UHQ4 241 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 RPL26L1Q9UNX3 145 aaKnown RBP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 ZFP37Q9Y6Q3 630 aaPredicted RBP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 ANGPT2O15123 496 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 GPR39O43194 453 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 GRID2O43424 1007 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 CPOXP36551 454 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 SP3Q02447 781 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 DENND5AQ6IQ26 1287 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 NSUN5Q96P11 429 aaKnown RBP10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 EGFL8Q99944 293 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 RTKNQ9BST9 563 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 GPR63Q9BZJ6 419 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 CATSPERZQ9NTU4 200 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 HACD3Q9P035 362 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 Q9Y3F1 56 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 PTPRFP10586 1907 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 A0A087X1B8 175 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 MT-ND1P03886 318 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 TACR2P21452 398 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 ARNTP27540 789 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 SLC11A2P49281 568 aa10.47□□□□□ -0.73
CPSF1P1-201ENST00000397477 ZNF598Q86UK7 904 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms