RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 MMAAQ8IVH4 418 aaKnown RBP23.67■■□□□ 1.38
TSPAN4-202ENST00000397396 UBLCP1Q8WVY7 318 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-202ENST00000397396 RAB7BQ96AH8 199 aa23.67■■□□□ 1.38
TSPAN4-202ENST00000397396 C9orf72Q96LT7 481 aa23.67■■□□□ 1.38
TSPAN4-202ENST00000397396 MCCC1Q96RQ3 725 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-202ENST00000397396 C19orf43Q9BQ61 176 aa23.67■■□□□ 1.38
TSPAN4-202ENST00000397396 IER2Q9BTL4 223 aa23.67■■□□□ 1.38
TSPAN4-202ENST00000397396 TBC1D17Q9HA65 648 aa23.67■■□□□ 1.38
TSPAN4-202ENST00000397396 LMAN1LQ9HAT1 526 aa23.67■■□□□ 1.38
TSPAN4-202ENST00000397396 NINJ2Q9NZG7 142 aa23.67■■□□□ 1.38
TSPAN4-202ENST00000397396 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.67■■□□□ 1.381e-6■■■■□ 22.7
TSPAN4-202ENST00000397396 FAM170BA6NMN3 283 aa23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 BANF1O75531 89 aa23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 USP1O94782 785 aa23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 ABHD2P08910 425 aa23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 PAMP19021 973 aa23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 PSMD8P48556 350 aa23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 NEK3P51956 506 aa23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 SATB1Q01826 763 aa23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 TAF1AQ15573 450 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 CST6Q15828 149 aa23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 SPANXN3Q5MJ09 141 aa23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 DENND2CQ68D51 928 aa23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 MPP5Q8N3R9 675 aa23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 HDAC8Q9BY41 377 aa23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 POLMQ9NP87 494 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 TCF20Q9UGU0 1960 aaKnown RBP23.66■■□□□ 1.38
TSPAN4-202ENST00000397396 A0A1W2PQF6 199 aa23.65■■□□□ 1.38
TSPAN4-202ENST00000397396 C7P10643 843 aa23.65■■□□□ 1.38
TSPAN4-202ENST00000397396 ELP6Q0PNE2 266 aa23.65■■□□□ 1.38
TSPAN4-202ENST00000397396 MSLNQ13421 630 aaPredicted RBP23.65■■□□□ 1.38
TSPAN4-202ENST00000397396 STEAP4Q687X5 459 aa23.65■■□□□ 1.38
TSPAN4-202ENST00000397396 FBXL19Q6PCT2 694 aa23.65■■□□□ 1.38
TSPAN4-202ENST00000397396 GSDMBQ8TAX9 411 aa23.65■■□□□ 1.38
TSPAN4-202ENST00000397396 WDR83Q9BRX9 315 aaKnown RBP23.65■■□□□ 1.38
TSPAN4-202ENST00000397396 SEMA4AQ9H3S1 761 aa23.65■■□□□ 1.38
TSPAN4-202ENST00000397396 VPS37BQ9H9H4 285 aa23.65■■□□□ 1.38
TSPAN4-202ENST00000397396 ZNF711Q9Y462 761 aa23.65■■□□□ 1.38
TSPAN4-202ENST00000397396 RPS6KL1Q9Y6S9 549 aa23.65■■□□□ 1.38
TSPAN4-202ENST00000397396 ANTXRLA6NF34 631 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 RIPK2O43353 540 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 DNTTP04053 509 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 ZNF30P17039 623 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 SLC8A1P32418 973 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 STX2P32856 288 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 MAGEA9P43362 315 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 DGKEP52429 567 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 COPAP53621 1224 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 CRADDP78560 199 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 SIGLEC14Q08ET2 396 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 FRG1Q14331 258 aaKnown RBP23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 KYNUQ16719 465 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 SKIDA1Q1XH10 827 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 TTC31Q49AM3 519 aaPredicted RBP23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 ZNF449Q6P9G9 518 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 ERN2Q76MJ5 926 aaKnown RBP23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 PARS2Q7L3T8 475 aaKnown RBP23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 SYT13Q7L8C5 426 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 TTC7BQ86TV6 843 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 TMEM135Q86UB9 458 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 ZSWIM9Q86XI8 627 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.64■■□□□ 1.381e-6■■■■□ 22.2
TSPAN4-202ENST00000397396 AGGF1Q8N302 714 aaeCLIP23.64■■□□□ 1.381e-7■■■■□ 23.7
TSPAN4-202ENST00000397396 GABPB2Q8TAK5 448 aaPredicted RBP23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 STYXQ8WUJ0 223 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 CFAP36Q96G28 342 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 LRRC4CQ9HCJ2 640 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 SARDHQ9UL12 918 aa23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.64■■□□□ 1.38
TSPAN4-202ENST00000397396 STK25O00506 426 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 CTPS1P17812 591 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 LPOP22079 712 aaPredicted RBP23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 VIPR1P32241 457 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 HSD17B3P37058 310 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 RPS9P46781 194 aaKnown RBP23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 RPS14P62263 151 aaKnown RBP23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 CRYMQ14894 314 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 CRY1Q16526 586 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 HP1BP3Q5SSJ5 553 aaPredicted RBP23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 TSTD2Q5T7W7 516 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 KIAA1211LQ6NV74 962 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 UNC5AQ6ZN44 842 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 C3orf62Q6ZUJ4 267 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 CYS1Q717R9 158 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 PJA1Q8NG27 643 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 ZNF669Q96BR6 464 aaPredicted RBP23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 GPR63Q9BZJ6 419 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 ZFYVE1Q9HBF4 777 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 CHRAC1Q9NRG0 131 aa23.63■■□□□ 1.37
TSPAN4-202ENST00000397396 A0A087WUV0 522 aaPredicted RBP23.62■■□□□ 1.37
TSPAN4-202ENST00000397396 MROH6A6NGR9 719 aa23.62■■□□□ 1.37
TSPAN4-202ENST00000397396 ACSL3O95573 720 aa23.62■■□□□ 1.37
TSPAN4-202ENST00000397396 ADRB3P13945 408 aa23.62■■□□□ 1.37
TSPAN4-202ENST00000397396 TIMP2P16035 220 aa23.62■■□□□ 1.37
TSPAN4-202ENST00000397396 HNF1BP35680 557 aa23.62■■□□□ 1.37
TSPAN4-202ENST00000397396 HADHAP40939 763 aa23.62■■□□□ 1.37
TSPAN4-202ENST00000397396 ABL2P42684 1182 aa23.62■■□□□ 1.37
TSPAN4-202ENST00000397396 ARHGEF7Q14155 803 aa23.62■■□□□ 1.37
TSPAN4-202ENST00000397396 ANKRD20A4Q4UJ75 823 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms