RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TFE3P19532 575 aaPredicted RBP9.5□□□□□ -0.89
NEDD9-203ENST00000397378 GKP32189 559 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 ETFBP38117 255 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 PPP1R2P41236 205 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 MARSP56192 900 aaKnown RBP9.5□□□□□ -0.89
NEDD9-203ENST00000397378 GEMIN4P57678 1058 aaKnown RBP9.5□□□□□ -0.89
NEDD9-203ENST00000397378 SNRPD1P62314 119 aaKnown RBP9.5□□□□□ -0.89
NEDD9-203ENST00000397378 DEUP1Q05D60 604 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 STIM1Q13586 685 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 POLD3Q15054 466 aaPredicted RBP9.5□□□□□ -0.89
NEDD9-203ENST00000397378 KLHL40Q2TBA0 621 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 AMZ1Q400G9 498 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 NADK2Q4G0N4 442 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 PTPN20Q4JDL3 420 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 CERCAMQ5T4B2 595 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 TTI2Q6NXR4 508 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 OGFOD3Q6PK18 319 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 RD3Q7Z3Z2 195 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 NLGN4XQ8N0W4 816 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 NLGN4YQ8NFZ3 816 aaPredicted RBP9.5□□□□□ -0.89
NEDD9-203ENST00000397378 OR2AP1Q8NGE2 309 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 OR6K2Q8NGY2 324 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 CXorf40AQ8TE69 158 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 ARHGEF2Q92974 986 aaKnown RBP9.5□□□□□ -0.89
NEDD9-203ENST00000397378 TSACCQ96A04 125 aaPredicted RBP9.5□□□□□ -0.89
NEDD9-203ENST00000397378 RBM15Q96T37 977 aaKnown RBP eCLIP9.5□□□□□ -0.892e-6■■■■■ 33.2
NEDD9-203ENST00000397378 DDA1Q9BW61 102 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 ASPSCR1Q9BZE9 553 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 ZYG11BQ9C0D3 744 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 SLC39A1Q9NY26 324 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.5□□□□□ -0.89
NEDD9-203ENST00000397378 LRIT1Q9P2V4 623 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 PPARGC1AQ9UBK2 798 aaKnown RBP9.5□□□□□ -0.89
NEDD9-203ENST00000397378 ACTL7AQ9Y615 435 aa9.5□□□□□ -0.89
NEDD9-203ENST00000397378 KRIT1O00522 736 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 MMP20O60882 483 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 SRGAP2O75044 1071 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 RFPL1O75677 317 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 SMC2O95347 1197 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 PDGFAP04085 211 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 MAP4P27816 1152 aaKnown RBP9.49□□□□□ -0.89
NEDD9-203ENST00000397378 HTR1BP28222 390 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 SCNN1AP37088 669 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 SULT1E1P49888 294 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 SUOXP51687 545 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 SRP54P61011 504 aaKnown RBP9.49□□□□□ -0.89
NEDD9-203ENST00000397378 NFATC4Q14934 902 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 IRF4Q15306 451 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 MYLK3Q32MK0 819 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 SLC25A52Q3SY17 297 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 PRR30Q53SZ7 412 aaPredicted RBP9.49□□□□□ -0.89
NEDD9-203ENST00000397378 DCAF12Q5T6F0 453 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 ENPP7Q6UWV6 458 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 TTC7BQ86TV6 843 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 FAM129CQ86XR2 697 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 PASD1Q8IV76 773 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 HSCBQ8IWL3 235 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 FMR1NBQ8N0W7 255 aaPredicted RBP9.49□□□□□ -0.89
NEDD9-203ENST00000397378 RYBPQ8N488 228 aaPredicted RBP9.49□□□□□ -0.89
NEDD9-203ENST00000397378 ATL2Q8NHH9 583 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 SHC3Q92529 594 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 SMARCE1Q969G3 411 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 CCDC74BQ96LY2 380 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 KLHL32Q96NJ5 620 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 RETREG1Q9H6L5 497 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 CYP4F12Q9HCS2 524 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 KCND3Q9UK17 655 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 TLK1Q9UKI8 766 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 PILRAQ9UKJ1 303 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 ENTPD4Q9Y227 616 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 PCDHB3Q9Y5E6 796 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.49□□□□□ -0.89
NEDD9-203ENST00000397378 MRPS18BQ9Y676 258 aaKnown RBP9.49□□□□□ -0.89
NEDD9-203ENST00000397378 DGKBQ9Y6T7 804 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 APCP25054 2843 aa9.49□□□□□ -0.89
NEDD9-203ENST00000397378 IGHV5-10-1A0A0J9YXX1 117 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 B4DGG1 531 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 NUDT21O43809 227 aaKnown RBP9.48□□□□□ -0.89
NEDD9-203ENST00000397378 GNA14O95837 355 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 TNFP01375 233 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 CD44P16070 742 aaKnown RBP9.48□□□□□ -0.89
NEDD9-203ENST00000397378 CSTF2P33240 577 aaKnown RBP eCLIP9.48□□□□□ -0.892e-7■■■■□ 23.8
NEDD9-203ENST00000397378 ACVRL1P37023 503 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 LEPRP48357 1165 aaKnown RBP9.48□□□□□ -0.89
NEDD9-203ENST00000397378 NRG1Q02297 640 aaPredicted RBP9.48□□□□□ -0.89
NEDD9-203ENST00000397378 PTK2Q05397 1052 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 RAD51Q06609 339 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 HLTFQ14527 1009 aaKnown RBP eCLIP9.48□□□□□ -0.89
NEDD9-203ENST00000397378 LRRC14Q15048 493 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 AGERQ15109 404 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 INPP5JQ15735 1006 aaPredicted RBP9.48□□□□□ -0.89
NEDD9-203ENST00000397378 CLPPQ16740 277 aaPredicted RBP9.48□□□□□ -0.89
NEDD9-203ENST00000397378 WSCD2Q2TBF2 565 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 TMEM52BQ4KMG9 183 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 C14orf28Q4W4Y0 310 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 ANKS6Q68DC2 871 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 TRIM65Q6PJ69 517 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 GDPD4Q6W3E5 623 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 BNIPLQ7Z465 357 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 DRC7Q8IY82 874 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms