RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ADAM12O43184 909 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 RPP40O75818 363 aaKnown RBP16.86■□□□□ 0.29
NUP50-202ENST00000396096 KRT34O76011 436 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 IPO13O94829 963 aaKnown RBP16.86■□□□□ 0.29
NUP50-202ENST00000396096 NDST3O95803 873 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 SERPINF2P08697 491 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 SLC11A2P49281 568 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 DEFB115Q30KQ5 88 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 SH2D4BQ5SQS7 431 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 SLC22A9Q8IVM8 553 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 RNF168Q8IYW5 571 aaPredicted RBP16.86■□□□□ 0.29
NUP50-202ENST00000396096 DEFB107AQ8IZN7 70 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 JADE3Q92613 823 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 PLD4Q96BZ4 506 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 OSBPL1AQ9BXW6 950 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 SHCBP1LQ9BZQ2 653 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 SEPT3Q9UH03 358 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 SCN5AQ14524 2016 aa16.86■□□□□ 0.29
NUP50-202ENST00000396096 ANKRD36A6QL64 1941 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 NEMP1O14524 444 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 KIF3CO14782 793 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 GJB3O75712 270 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 CXCL10P02778 98 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 OGNP20774 298 aaKnown RBP16.85■□□□□ 0.29
NUP50-202ENST00000396096 FDXRP22570 491 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 PSMA3P25788 255 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 SUOXP51687 545 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 CDKN2DP55273 166 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 CFAP52Q8N1V2 620 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 FBXW8Q8N3Y1 598 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 PPFIBP2Q8ND30 876 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 ANKRD49Q8WVL7 239 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 SGF29Q96ES7 293 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 TBATAQ96M53 351 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 PSKH2Q96QS6 385 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 UNKQ9C0B0 810 aaKnown RBP16.85■□□□□ 0.29
NUP50-202ENST00000396096 POPDC3Q9HBV1 291 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 EML4Q9HC35 981 aaKnown RBP16.85■□□□□ 0.29
NUP50-202ENST00000396096 HSFX1Q9UBD0 423 aa16.85■□□□□ 0.29
NUP50-202ENST00000396096 ZFP37Q9Y6Q3 630 aaPredicted RBP16.85■□□□□ 0.29
NUP50-202ENST00000396096 A0A0D9SEW6 157 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 ZNF840PA6NDX5 716 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 NEMP2A6NFY4 417 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 KDELR3O43731 214 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 CLDN11O75508 207 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 GLP2RO95838 553 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 GOT2P00505 430 aaKnown RBP16.84■□□□□ 0.29
NUP50-202ENST00000396096 JUNP05412 331 aaKnown RBP16.84■□□□□ 0.29
NUP50-202ENST00000396096 SP100P23497 879 aaPredicted RBP16.84■□□□□ 0.29
NUP50-202ENST00000396096 MTTPP55157 894 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 PRMT2P55345 433 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 SULT2A1Q06520 285 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 TBL3Q12788 808 aaKnown RBP16.84■□□□□ 0.29
NUP50-202ENST00000396096 RFTN1Q14699 578 aaPredicted RBP16.84■□□□□ 0.29
NUP50-202ENST00000396096 USP41Q3LFD5 358 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 HECTD3Q5T447 861 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 MRNIPQ6NTE8 343 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 TMEM207Q6UWW9 146 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 KIRREL3Q8IZU9 778 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 DNAJC1Q96KC8 554 aaKnown RBP16.84■□□□□ 0.29
NUP50-202ENST00000396096 TRPC7Q9HCX4 862 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 S100A14Q9HCY8 104 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 PRPF19Q9UMS4 504 aaKnown RBP16.84■□□□□ 0.29
NUP50-202ENST00000396096 CCDC162PA2VCL2 907 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 OR51F1A6NGY5 319 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 CCL22O00626 93 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 SDHDO14521 159 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 CD3EAPO15446 510 aaKnown RBP16.84■□□□□ 0.29
NUP50-202ENST00000396096 GJB5O95377 273 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 KCNA5P22460 613 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 NFKB2Q00653 900 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 BLMHQ13867 455 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 CHST9Q7L1S5 443 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 SNX32Q86XE0 403 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 AFAP1L2Q8N4X5 818 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 OR7D4Q8NG98 312 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 OR52K2Q8NGK3 314 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 SHKBP1Q8TBC3 707 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 BLOC1S5Q8TDH9 187 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 L3HYPDHQ96EM0 354 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 MYCBPQ99417 103 aaPredicted RBP16.84■□□□□ 0.29
NUP50-202ENST00000396096 TRMOQ9BU70 441 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 CWH43Q9H720 699 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 ZBTB26Q9HCK0 441 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 MRGBPQ9NV56 204 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 UBA2Q9UBT2 640 aaPredicted RBP16.84■□□□□ 0.29
NUP50-202ENST00000396096 VPS28Q9UK41 221 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 ARL5AQ9Y689 179 aa16.84■□□□□ 0.29
NUP50-202ENST00000396096 MICAL3Q7RTP6 2002 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 ILVBLA1L0T0 632 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 MAP3K7O43318 606 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 COCHO43405 550 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 ZMPSTE24O75844 475 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 HMGA1P17096 107 aaKnown RBP16.83■□□□□ 0.28
NUP50-202ENST00000396096 CR2P20023 1033 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 CES1P23141 567 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 OR1D2P34982 312 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 ABL2P42684 1182 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 OXCT1P55809 520 aa16.83■□□□□ 0.28
NUP50-202ENST00000396096 PEX6Q13608 980 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms