RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ZXDBP98169 803 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 DLG1Q12959 904 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 CDH18Q13634 790 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 LIPMQ5VYY2 423 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 LMNTD2Q8IXW0 634 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 GPR65Q8IYL9 337 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 TTC8Q8TAM2 541 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 NSL1Q96IY1 281 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 LNPEPQ9UIQ6 1025 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 VPS28Q9UK41 221 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 LSM7Q9UK45 103 aaKnown RBP12.2□□□□□ -0.46
ITGB1-202ENST00000396033 SSX2IPQ9Y2D8 614 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 KLHL33A6NCF5 533 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 LUC7L3O95232 432 aaKnown RBP12.19□□□□□ -0.46
ITGB1-202ENST00000396033 SBK3P0C264 359 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 KPNA2P52292 529 aaKnown RBP12.19□□□□□ -0.46
ITGB1-202ENST00000396033 ALDH18A1P54886 795 aaKnown RBP12.19□□□□□ -0.46
ITGB1-202ENST00000396033 ACVR1Q04771 509 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 KRT72Q14CN4 511 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 ZNF783Q6ZMS7 281 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 GALNT7Q86SF2 657 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 HS6ST3Q8IZP7 471 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 STYXQ8WUJ0 223 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 PEX13Q92968 403 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 TMA16Q96EY4 203 aaKnown RBP12.19□□□□□ -0.46
ITGB1-202ENST00000396033 TSPAN17Q96FV3 270 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 ZBED2Q9BTP6 218 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 GATA5Q9BWX5 397 aaPredicted RBP12.19□□□□□ -0.46
ITGB1-202ENST00000396033 TDRD1Q9BXT4 1180 aaKnown RBP12.19□□□□□ -0.46
ITGB1-202ENST00000396033 FAM96AQ9H5X1 160 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 OBSL1O75147 1896 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 GREM1O60565 184 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 CCDC22O60826 627 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 GLP2RO95838 553 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 SLC4A1P02730 911 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 PTPN4P29074 926 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 HECTD2Q5U5R9 776 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 Q6ZNB5 142 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 GAREM2Q75VX8 874 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 TMC7Q7Z402 723 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 TMEM151AQ8N4L1 468 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.19□□□□□ -0.462e-13■■□□□ 14.2
ITGB1-202ENST00000396033 LPCAT1Q8NF37 534 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 PTCD3Q96EY7 689 aaKnown RBP12.19□□□□□ -0.46
ITGB1-202ENST00000396033 NUDCD1Q96RS6 583 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 STN1Q9H668 368 aaKnown RBP12.19□□□□□ -0.46
ITGB1-202ENST00000396033 C15orf41Q9Y2V0 281 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 CCDC162PA2VCL2 907 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 CRTAMO95727 393 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 ATP5BP06576 529 aaKnown RBP12.19□□□□□ -0.46
ITGB1-202ENST00000396033 CSHL1Q14406 222 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 ZNF781Q8N8C0 355 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 KLHL23Q8NBE8 558 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 MICAL1Q8TDZ2 1067 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 HEXDCQ8WVB3 486 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 SPDL1Q96EA4 605 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 GPR78Q96P69 363 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 MRPL46Q9H2W6 279 aaKnown RBP12.19□□□□□ -0.46
ITGB1-202ENST00000396033 BAIAP2L1Q9UHR4 511 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 ARIH1Q9Y4X5 557 aaPredicted RBP12.19□□□□□ -0.46
ITGB1-202ENST00000396033 SPO11Q9Y5K1 396 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 RAI2Q9Y5P3 530 aa12.19□□□□□ -0.46
ITGB1-202ENST00000396033 CXCL14O95715 111 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 S1PR4O95977 384 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 C8AP07357 584 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 CALB2P22676 271 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 CES1P23141 567 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 CSKP41240 450 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 GRIA4P48058 902 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 NAA25Q14CX7 972 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 THEMIS2Q5TEJ8 643 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 FAM91A1Q658Y4 838 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 MRNIPQ6NTE8 343 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 MAVSQ7Z434 540 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 GLT6D1Q7Z4J2 308 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 UTP4Q969X6 686 aaKnown RBP12.18□□□□□ -0.46
ITGB1-202ENST00000396033 GPAMQ9HCL2 828 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 ACSS2Q9NR19 701 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 PCDHGC4Q9Y5F7 938 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 ENO4A6NNW6 628 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 TRAFD1O14545 582 aaPredicted RBP12.18□□□□□ -0.46
ITGB1-202ENST00000396033 CD3EAPO15446 510 aaKnown RBP12.18□□□□□ -0.46
ITGB1-202ENST00000396033 ADH1AP07327 375 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 ESRRAP11474 423 aaPredicted RBP12.18□□□□□ -0.46
ITGB1-202ENST00000396033 PRKAA2P54646 552 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 FAM83EQ2M2I3 478 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 CFAP157Q5JU67 520 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 CCDC149Q6ZUS6 474 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 TMC8Q8IU68 726 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 ELMOD1Q8N336 334 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 WFDC5Q8TCV5 224 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 PDCD6IPQ8WUM4 868 aaKnown RBP12.18□□□□□ -0.46
ITGB1-202ENST00000396033 FEM1AQ9BSK4 669 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 TBC1D10AQ9BXI6 508 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 CATSPERZQ9NTU4 200 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 DNAJC28Q9NX36 388 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.18□□□□□ -0.46
ITGB1-202ENST00000396033 CFAP97Q9P2B7 532 aa12.18□□□□□ -0.46
ITGB1-202ENST00000396033 APOBEC2Q9Y235 224 aaKnown RBP12.18□□□□□ -0.46
ITGB1-202ENST00000396033 CRYL1Q9Y2S2 319 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms