RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 POLHQ9Y253 713 aa5.71□□□□□ -1.5
AP3S1-202ENST00000395548 TTLL3Q9Y4R7 772 aa5.71□□□□□ -1.5
AP3S1-202ENST00000395548 MYH6P13533 1939 aa5.71□□□□□ -1.5
AP3S1-202ENST00000395548 PTPRDP23468 1912 aa5.71□□□□□ -1.5
AP3S1-202ENST00000395548 MYLKQ15746 1914 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 CEP192Q8TEP8 1941 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 GAGE12BA1L429 117 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 HEATR9A2RTY3 570 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 GAGE12HA6NDE8 117 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 AHRRA9YTQ3 701 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 KLRF2D3W0D1 207 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 FAM227AF5H4B4 570 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 RNASET2O00584 256 aaKnown RBP5.7□□□□□ -1.5
AP3S1-202ENST00000395548 PHF2O75151 1096 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 ITGA10O75578 1167 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 NADKO95544 446 aaPredicted RBP5.7□□□□□ -1.5
AP3S1-202ENST00000395548 PRKCBP05771 671 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 CKMT2P17540 419 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 CTSSP25774 331 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 SMARCA1P28370 1054 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 AXLP30530 894 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 ALDH1A3P47895 512 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 IFNAR2P48551 515 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 NT5C2P49902 561 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 PRKG2Q13237 762 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 PDCD1Q15116 288 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 KIF19Q2TAC6 998 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 CCDC38Q502W7 563 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 EMC10Q5UCC4 262 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 MBNL2Q5VZF2 373 aaKnown RBP5.7□□□□□ -1.5
AP3S1-202ENST00000395548 RETSATQ6NUM9 610 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 NOTUMQ6P988 496 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 FAM180AQ6UWF9 173 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 C4orf50Q6ZRC1 276 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 OVCH2Q7RTZ1 564 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 GDF7Q7Z4P5 450 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 IQCA1Q86XH1 822 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 CMTM8Q8IZV2 173 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 ARL14Q8N4G2 192 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 ARHGAP45Q92619 1136 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 GRAMD1AQ96CP6 724 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 MYEOVQ96EZ4 313 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 SLC46A1Q96NT5 459 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 MLST8Q9BVC4 326 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 GTPBP4Q9BZE4 634 aaKnown RBP5.7□□□□□ -1.5
AP3S1-202ENST00000395548 NUP62CLQ9H1M0 184 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 TMEM245Q9H330 911 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 TOPORSQ9NS56 1045 aaPredicted RBP5.7□□□□□ -1.5
AP3S1-202ENST00000395548 TRPM5Q9NZQ8 1165 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 PCDHB1Q9Y5F3 818 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 HS3ST4Q9Y661 456 aa5.7□□□□□ -1.5
AP3S1-202ENST00000395548 TACC2O95359 2948 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 CCDC168Q8NDH2 2452 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 LRRK1Q38SD2 2015 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 CASTOR2A6NHX0 329 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 MYMKA6NI61 221 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 YKT6O15498 198 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 TMEM127O75204 238 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 ERLIN2O94905 339 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 PRKCGP05129 697 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 KRT7P08729 469 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 PRF1P14222 555 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 GABRG2P18507 467 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 CAPN3P20807 821 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 ABCB4P21439 1286 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 ENPP1P22413 925 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 GNLYP22749 145 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 GABRR2P28476 465 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 CD6P30203 668 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 CDC25CP30307 473 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 HOXA11P31270 313 aaPredicted RBP5.69□□□□□ -1.5
AP3S1-202ENST00000395548 CRHR1P34998 444 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 GPR3P46089 330 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 CSNK1EP49674 416 aaKnown RBP5.69□□□□□ -1.5
AP3S1-202ENST00000395548 CLCA4Q14CN2 919 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.69□□□□□ -1.5
AP3S1-202ENST00000395548 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 VPS53Q5VIR6 699 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 RNF220Q5VTB9 566 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 USP17L6PQ6QN14 398 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 ITIH5Q86UX2 942 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 RHPN2Q8IUC4 686 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 MCEMP1Q8IX19 187 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 CMIPQ8IY22 773 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 KBTBD3Q8NAB2 608 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 ZNF480Q8WV37 535 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 JADE3Q92613 823 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 HDAC2Q92769 488 aaKnown RBP5.69□□□□□ -1.5
AP3S1-202ENST00000395548 TBC1D20Q96BZ9 403 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 KIF1BPQ96EK5 621 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 SEC62Q99442 399 aaKnown RBP5.69□□□□□ -1.5
AP3S1-202ENST00000395548 MXRA8Q9BRK3 442 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 PAAF1Q9BRP4 392 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 SLC26A6Q9BXS9 759 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 TMEM60Q9H2L4 133 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 TBC1D22BQ9NU19 505 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 BLOC1S4Q9NUP1 217 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 TDP1Q9NUW8 608 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 DUS2Q9NX74 493 aaKnown RBP5.69□□□□□ -1.5
AP3S1-202ENST00000395548 CDC23Q9UJX2 597 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms