RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 FOXN2P32314 431 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 CD70P32970 193 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 CHRNA4P43681 627 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 LMAN2Q12907 356 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 CYTH1Q15438 398 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 UGP2Q16851 508 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 RALGPS2Q86X27 583 aaPredicted RBP19.4■□□□□ 0.7
LMNB1-202ENST00000395354 CACNA2D3Q8IZS8 1091 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 SLC25A41Q8N5S1 370 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 PEX13Q92968 403 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 SEC16BQ96JE7 1060 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 LMLNQ96KR4 655 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 ZNF778Q96MU6 729 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 FEM1AQ9BSK4 669 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 SLC17A7Q9P2U7 560 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 CXorf51AA0A1B0GTR3 108 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 CBX4O00257 560 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 CTHP32929 405 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 EIF2DP41214 584 aaKnown RBP19.4■□□□□ 0.7
LMNB1-202ENST00000395354 MAGEA12P43365 314 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 ARCN1P48444 511 aaKnown RBP19.4■□□□□ 0.7
LMNB1-202ENST00000395354 GALK1P51570 392 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 PDE1BQ01064 536 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 RALGPS1Q5JS13 557 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 SIRPB2Q5JXA9 342 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 TSTD2Q5T7W7 516 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 NAIF1Q69YI7 327 aaPredicted RBP19.4■□□□□ 0.7
LMNB1-202ENST00000395354 GRAMD4Q6IC98 578 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 KDELC2Q7Z4H8 507 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 UBALD2Q8IYN6 164 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 NDUFAF2Q8N183 169 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 DCAF4L2Q8NA75 395 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 LRRC8CQ8TDW0 803 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 CABS1Q96KC9 395 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 NUDCD1Q96RS6 583 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 FAM167BQ9BTA0 163 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 IARS2Q9NSE4 1012 aaKnown RBP19.4■□□□□ 0.7
LMNB1-202ENST00000395354 SLC17A6Q9P2U8 582 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 MUTYHQ9UIF7 546 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 GRID1Q9ULK0 1009 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 SLC27A6Q9Y2P4 619 aa19.4■□□□□ 0.7
LMNB1-202ENST00000395354 MROH6A6NGR9 719 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.39■□□□□ 0.69
LMNB1-202ENST00000395354 INSIG1O15503 277 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 ALDOAP04075 364 aaKnown RBP19.39■□□□□ 0.69
LMNB1-202ENST00000395354 GLDCP23378 1020 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 MZF1P28698 734 aaPredicted RBP19.39■□□□□ 0.69
LMNB1-202ENST00000395354 CSKP41240 450 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 POLD2P49005 469 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 SERPINB8P50452 374 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 ARF5P84085 180 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 NSUN2Q08J23 767 aaKnown RBP eCLIP19.39■□□□□ 0.69
LMNB1-202ENST00000395354 SLC12A1Q13621 1099 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 INSCQ1MX18 579 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 ESRP1Q6NXG1 681 aaKnown RBP19.39■□□□□ 0.69
LMNB1-202ENST00000395354 ALG14Q96F25 216 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 AGAP2Q99490 1192 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 P2RY13Q9BPV8 354 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 FBRSL1Q9HCM7 1045 aaKnown RBP19.39■□□□□ 0.69
LMNB1-202ENST00000395354 IL1RAPL1Q9NZN1 696 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 WNT16Q9UBV4 365 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 DCDC2Q9UHG0 476 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 RIMKLBQ9ULI2 386 aa19.39■□□□□ 0.69
LMNB1-202ENST00000395354 ATXN2Q99700 1313 aaKnown RBP19.38■□□□□ 0.69
LMNB1-202ENST00000395354 NDST3O95803 873 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 PABPC1P11940 636 aaKnown RBP19.38■□□□□ 0.69
LMNB1-202ENST00000395354 NUMBP49757 651 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 PLK1P53350 603 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 KDSRQ06136 332 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 MESP2Q0VG99 397 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 ILF2Q12905 390 aaKnown RBP19.38■□□□□ 0.69
LMNB1-202ENST00000395354 SEPT6Q14141 434 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 ITIH4Q14624 930 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 DBN1Q16643 649 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 PREPLQ4J6C6 727 aaPredicted RBP19.38■□□□□ 0.69
LMNB1-202ENST00000395354 TXNDC11Q6PKC3 985 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 KYAT3Q6YP21 454 aaKnown RBP19.38■□□□□ 0.69
LMNB1-202ENST00000395354 KIAA0907Q7Z7F0 614 aaPredicted RBP19.38■□□□□ 0.69
LMNB1-202ENST00000395354 APCDD1Q8J025 514 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.38■□□□□ 0.69
LMNB1-202ENST00000395354 ANKS4BQ8N8V4 417 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 CCDC197Q8NCU1 140 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 CALML6Q8TD86 181 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 FAM111AQ96PZ2 611 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 TRIB3Q96RU7 358 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 SCUBE2Q9NQ36 999 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 PCMTD2Q9NV79 361 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 FGFR1OP2Q9NVK5 253 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 VPS28Q9UK41 221 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 FBXL21Q9UKT6 434 aa19.38■□□□□ 0.69
LMNB1-202ENST00000395354 COL4A2P08572 1712 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 MIA3Q5JRA6 1907 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 TPP1O14773 563 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 SNX3O60493 162 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 GLRA3O75311 464 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 VAPBO95292 243 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 MPOP05164 745 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 ARNTP27540 789 aa19.37■□□□□ 0.69
LMNB1-202ENST00000395354 THOC5Q13769 683 aaKnown RBP19.37■□□□□ 0.69
LMNB1-202ENST00000395354 CNGA3Q16281 694 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms