RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 ANO7Q6IWH7 933 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 TRIM74Q86UV6 250 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 TRIM73Q86UV7 250 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 CDCA5Q96FF9 252 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 LGMNQ99538 433 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 RBM4BQ9BQ04 359 aaKnown RBP17.28■□□□□ 0.36
SIN3A-203ENST00000394949 RBM4Q9BWF3 364 aaKnown RBP17.28■□□□□ 0.36
SIN3A-203ENST00000394949 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.28■□□□□ 0.365e-7■■□□□ 12.2
SIN3A-203ENST00000394949 FAM198AQ9UFP1 575 aa17.28■□□□□ 0.36
SIN3A-203ENST00000394949 ANXA5P08758 320 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 PRKAR1AP10644 381 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 GOT1P17174 413 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 ZSWIM7Q19AV6 140 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 PAGE2BQ5JRK9 111 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 CCNYL2Q5T2Q4 361 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 USP50Q70EL3 339 aaPredicted RBP17.27■□□□□ 0.36
SIN3A-203ENST00000394949 ERI1Q8IV48 349 aaKnown RBP17.27■□□□□ 0.36
SIN3A-203ENST00000394949 OR5B17Q8NGF7 314 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 SLC47A1Q96FL8 570 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 ST6GALNAC4Q9H4F1 302 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 ABCC13Q9NSE7 274 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 FARP2O94887 1054 aaPredicted RBP17.27■□□□□ 0.36
SIN3A-203ENST00000394949 WDR4P57081 412 aaKnown RBP17.27■□□□□ 0.36
SIN3A-203ENST00000394949 FAM171A1Q5VUB5 890 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 KHDRBS2Q5VWX1 349 aaKnown RBP17.27■□□□□ 0.36
SIN3A-203ENST00000394949 AFTPHQ6ULP2 937 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 SLC4A11Q8NBS3 891 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 RAB2BQ8WUD1 216 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 ROPN1LQ96C74 230 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 VPS35Q96QK1 796 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 ATP13A1Q9HD20 1204 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 KLHL1Q9NR64 748 aa17.27■□□□□ 0.36
SIN3A-203ENST00000394949 LGALS2P05162 132 aa17.27■□□□□ 0.35
SIN3A-203ENST00000394949 CREB1P16220 341 aa17.27■□□□□ 0.35
SIN3A-203ENST00000394949 UBA1P22314 1058 aaKnown RBP17.27■□□□□ 0.35
SIN3A-203ENST00000394949 GRK4P32298 578 aa17.27■□□□□ 0.35
SIN3A-203ENST00000394949 ENPEPQ07075 957 aa17.27■□□□□ 0.35
SIN3A-203ENST00000394949 ZFP69Q49AA0 526 aa17.27■□□□□ 0.35
SIN3A-203ENST00000394949 UBR7Q8N806 425 aa17.27■□□□□ 0.35
SIN3A-203ENST00000394949 SLITRK2Q9H156 845 aa17.27■□□□□ 0.35
SIN3A-203ENST00000394949 SSR3Q9UNL2 185 aa17.27■□□□□ 0.35
SIN3A-203ENST00000394949 CARNS1A5YM72 827 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 PLK4O00444 970 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 LRIG2O94898 1065 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 MSX2P35548 267 aaPredicted RBP17.26■□□□□ 0.35
SIN3A-203ENST00000394949 TTPAP49638 278 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 CRY1Q16526 586 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 ZYG11AQ6WRX3 759 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 ADAMTSL2Q86TH1 951 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 CPSF7Q8N684 471 aaKnown RBP17.26■□□□□ 0.35
SIN3A-203ENST00000394949 OR2T12Q8NG77 320 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 ASZ1Q8WWH4 475 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 TMEM159Q96B96 161 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 P2RY11Q96G91 374 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 VWA7Q9Y334 891 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 ATP6AP2A0A1C7CYW4 349 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 IFRD1O00458 451 aaPredicted RBP17.26■□□□□ 0.35
SIN3A-203ENST00000394949 ATP6AP2O75787 350 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 CCNE2O96020 404 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 PYDC2Q56P42 97 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 BICRALQ6AI39 1079 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 ZBTB46Q86UZ6 589 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 JOSD2Q8TAC2 188 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 CD101Q93033 1021 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 TRMT13Q9NUP7 481 aaKnown RBP17.26■□□□□ 0.35
SIN3A-203ENST00000394949 RWDD3Q9Y3V2 267 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 LOC110117498-PIK3R3F6TDL0 507 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 ZBTB11O95625 1053 aaPredicted RBP17.26■□□□□ 0.35
SIN3A-203ENST00000394949 THRBP10828 461 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 PPIBP23284 216 aaKnown RBP17.26■□□□□ 0.35
SIN3A-203ENST00000394949 MATKP42679 507 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 CATSPERGQ6ZRH7 1159 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 NELL1Q92832 810 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 BTRCQ9Y297 605 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 NPM3O75607 178 aaKnown RBP17.26■□□□□ 0.35
SIN3A-203ENST00000394949 TUBA4AP68366 448 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 PRKCQQ04759 706 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 PLD1Q13393 1074 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 CBR4Q8N4T8 237 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 SMAD5Q99717 465 aaKnown RBP17.26■□□□□ 0.35
SIN3A-203ENST00000394949 ARL15Q9NXU5 204 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 RPS6KB2Q9UBS0 482 aa17.26■□□□□ 0.35
SIN3A-203ENST00000394949 SAMD4AQ9UPU9 718 aaKnown RBP17.26■□□□□ 0.35
SIN3A-203ENST00000394949 NFAT5O94916 1531 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 CCDC162PA2VCL2 907 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 ADM5C9JUS6 153 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 IPO13O94829 963 aaKnown RBP17.25■□□□□ 0.35
SIN3A-203ENST00000394949 ERCC2P18074 760 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 ITGB6P18564 788 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 LIMK2P53671 638 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 STRADAQ7RTN6 431 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 C18orf25Q96B23 403 aaPredicted RBP17.25■□□□□ 0.35
SIN3A-203ENST00000394949 ACO2Q99798 780 aaKnown RBP17.25■□□□□ 0.35
SIN3A-203ENST00000394949 SLC7A8Q9UHI5 535 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 ZBTB14O43829 449 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 RECQL4O94761 1208 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 RPL3P39023 403 aaKnown RBP17.25■□□□□ 0.35
SIN3A-203ENST00000394949 IDH3AP50213 366 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 INHBEP58166 350 aa17.25■□□□□ 0.35
SIN3A-203ENST00000394949 PDCD4Q53EL6 469 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms