RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ITPKBP27987 946 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 SUOXP51687 545 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 ZNF135P52742 658 aaPredicted RBP8.9□□□□□ -0.98
ATG4A-205ENST00000394892 PDX1P52945 283 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 ADKP55263 362 aaKnown RBP8.9□□□□□ -0.98
ATG4A-205ENST00000394892 CDH6P55285 790 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 YPEL5P62699 121 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 RFTN1Q14699 578 aaPredicted RBP8.9□□□□□ -0.98
ATG4A-205ENST00000394892 RTP5Q14D33 572 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 LRRC14Q15048 493 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 TCEA2Q15560 299 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 NFKBIBQ15653 356 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 CNGA3Q16281 694 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 CDKN3Q16667 212 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 HS1BP3Q53T59 392 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 PRRT3Q5FWE3 981 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 NCBP2-AS2Q69YL0 99 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 MACC1Q6ZN28 852 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 DPPA4Q7L190 304 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 TSPAN33Q86UF1 283 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 VSTM4Q8IW00 320 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 CACTIN-AS1Q8N1I8 211 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 LZTR1Q8N653 840 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 TEX26Q8N6G2 289 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 ZNF564Q8TBZ8 553 aaPredicted RBP8.9□□□□□ -0.98
ATG4A-205ENST00000394892 OR1E3Q8WZA6 343 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 RAPGEF5Q92565 580 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 FGF11Q92914 225 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 FAF2Q96CS3 445 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 PDXPQ96GD0 296 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 COQ10AQ96MF6 247 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 ZNF599Q96NL3 588 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 NCAPGQ9BPX3 1015 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 MGME1Q9BQP7 344 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 APOOQ9BUR5 198 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 CINPQ9BW66 212 aaPredicted RBP8.9□□□□□ -0.98
ATG4A-205ENST00000394892 BOCQ9BWV1 1114 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 LGR4Q9BXB1 951 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 PRORYQ9H606 182 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 SP110Q9HB58 689 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 FGF22Q9HCT0 170 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 SEPT3Q9UH03 358 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 IP6K2Q9UHH9 426 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 RABGEF1Q9UJ41 708 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 ST14Q9Y5Y6 855 aa8.9□□□□□ -0.98
ATG4A-205ENST00000394892 URB1O60287 2271 aaKnown RBP8.89□□□□□ -0.99
ATG4A-205ENST00000394892 EME2A4GXA9 379 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-205ENST00000394892 CFAP69A5D8W1 941 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 C3orf70A6NLC5 250 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-205ENST00000394892 LMO7DNF2Z398 122 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 GOLGA6L19H0YKK7 550 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 MYO1FO00160 1098 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 LZTS3O60299 673 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-205ENST00000394892 FZD6O60353 706 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 PRLP01236 227 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 PCCBP05166 539 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 PDHA1P08559 390 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 SERPINA4P29622 427 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 TRIM23P36406 574 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 ARL4AP40617 200 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 HK3P52790 923 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 AP1S1P61966 158 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 DAB2P98082 770 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 E2F1Q01094 437 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 GBE1Q04446 702 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 BCL2L1Q07817 233 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 NIPAL4Q0D2K0 466 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 ELP6Q0PNE2 266 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 TBX2Q13207 712 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-205ENST00000394892 NFATC4Q14934 902 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 PAFAH1B3Q15102 231 aaKnown RBP8.89□□□□□ -0.99
ATG4A-205ENST00000394892 SLC18A3Q16572 532 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 BROXQ5VW32 411 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 CRTC1Q6UUV9 634 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 TMCO3Q6UWJ1 677 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 HSD11B1LQ7Z5J1 315 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 RNF214Q8ND24 703 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 CCL4L1Q8NHW4 92 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 SNIP1Q8TAD8 396 aaKnown RBP8.89□□□□□ -0.99
ATG4A-205ENST00000394892 ARRDC2Q8TBH0 407 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 IFI44Q8TCB0 444 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 PIH1D2Q8WWB5 315 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 MAML1Q92585 1016 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 NUDCD1Q96RS6 583 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 ATP13A3Q9H7F0 1226 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 MRPL40Q9NQ50 206 aaKnown RBP8.89□□□□□ -0.99
ATG4A-205ENST00000394892 SPTLC3Q9NUV7 552 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 APOBEC3BQ9UH17 382 aaKnown RBP8.89□□□□□ -0.99
ATG4A-205ENST00000394892 SALL4Q9UJQ4 1053 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 CLCA2Q9UQC9 943 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 IGSF10Q6WRI0 2623 aa8.89□□□□□ -0.99
ATG4A-205ENST00000394892 GOLGA4Q13439 2230 aaKnown RBP8.89□□□□□ -0.99
ATG4A-205ENST00000394892 KNTC1P50748 2209 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 CPED1A4D0V7 1026 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 NPIPB15A6NHN6 443 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-205ENST00000394892 TPP1O14773 563 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 BRINP1O60477 761 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 HEXIM1O94992 359 aaKnown RBP8.88□□□□□ -0.99
ATG4A-205ENST00000394892 PGLSO95336 258 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 SOD1P00441 154 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms