RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 SRP54P61011 504 aaKnown RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 BEX3Q00994 111 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 PLD1Q13393 1074 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 DPYSQ14117 519 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 RNF220Q5VTB9 566 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 ZC3H7AQ8IWR0 971 aaKnown RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 IZUMO1Q8IYV9 350 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 PLD5Q8N7P1 536 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 DUSP16Q9BY84 665 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 B3GNT5Q9BYG0 378 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 C12orf65Q9H3J6 166 aaKnown RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 SPG21Q9NZD8 308 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 ARHGAP23Q9P227 1491 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 A0A0J9YYE9 177 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 COL6A2P12110 1019 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 GRM5P41594 1212 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 AIF1P55008 147 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 GNA13Q14344 377 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 PABPC1LQ4VXU2 614 aaKnown RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 TEX44Q53QW1 395 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 LCLAT1Q6UWP7 414 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 OR4L1Q8NH43 312 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 OR52E6Q96RD3 313 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 CIB1Q99828 191 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 GLOD4Q9HC38 313 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 DPP7Q9UHL4 492 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 MAGEL2Q9UJ55 1249 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 CDH22Q9UJ99 828 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 FOXO6A8MYZ6 492 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 RFXANKO14593 260 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 KPNA5O15131 536 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 B4GALT4O60513 344 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 SIN3BO75182 1162 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 GJB1P08034 283 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 NTSP30990 170 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 BTG3Q14201 252 aaPredicted RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 GK5Q6ZS86 529 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 MON1BQ7L1V2 547 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 DEFB132Q7Z7B7 95 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 C12orf50Q8NA57 414 aaPredicted RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 NKX2-3Q8TAU0 364 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 ASZ1Q8WWH4 475 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 VMP1Q96GC9 406 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 FCRL2Q96LA5 508 aaPredicted RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 NFKBIZQ9BYH8 718 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 ATXN10Q9UBB4 475 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 FZD1Q9UP38 647 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 CLDN5O00501 218 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 TMCC2O75069 709 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 NADKO95544 446 aaPredicted RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 LYNP07948 512 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 ARF4P18085 180 aaPredicted RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 CCT3P49368 545 aaKnown RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 SNRPD1P62314 119 aaKnown RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 PPIL2Q13356 520 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 MZT2AQ6P582 158 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 PROSER1Q86XN7 944 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 DSELQ8IZU8 1212 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 OR2T12Q8NG77 320 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 BORCS5Q969J3 196 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 EXOC2Q96KP1 924 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 TINF2Q9BSI4 451 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 CHID1Q9BWS9 393 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 PCDH12Q9NPG4 1184 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 DNMT3LQ9UJW3 386 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 GNEQ9Y223 722 aaKnown RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 ANGPT4Q9Y264 503 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 NR2E1Q9Y466 385 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 GOLGA4Q13439 2230 aaKnown RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 PPP1R11O60927 126 aaPredicted RBP13.16□□□□□ -0.3
LCA5-202ENST00000392959 UMPSP11172 480 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 CDH3P22223 829 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 GTF2E2P29084 291 aaKnown RBP13.16□□□□□ -0.3
LCA5-202ENST00000392959 CDK9P50750 372 aaKnown RBP13.16□□□□□ -0.3
LCA5-202ENST00000392959 JAM2P57087 298 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 BLMHQ13867 455 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 DLG2Q15700 870 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 RNASEH2BQ5TBB1 312 aaKnown RBP13.16□□□□□ -0.3
LCA5-202ENST00000392959 DENND5AQ6IQ26 1287 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 CYP20A1Q6UW02 462 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 TPGS1Q6ZTW0 290 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 IKBIPQ70UQ0 350 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 RD3Q7Z3Z2 195 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 NELL1Q92832 810 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 KLHL31Q9H511 634 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 RCOR3Q9P2K3 495 aaPredicted RBP13.16□□□□□ -0.3
LCA5-202ENST00000392959 SNHG28P0DPA3 235 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 RPL3P39023 403 aaKnown RBP13.16□□□□□ -0.3
LCA5-202ENST00000392959 SEMA5AQ13591 1074 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 VGLL4Q14135 290 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 KLHL12Q53G59 568 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 FNBP1LQ5T0N5 605 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 DOK6Q6PKX4 331 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 DSG4Q86SJ6 1040 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 FAM35AQ86V20 835 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 FAM20CQ8IXL6 584 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 LINGO1Q96FE5 620 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 ZDHHC6Q9H6R6 413 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 CORO2BQ9UQ03 480 aa13.16□□□□□ -0.3
LCA5-202ENST00000392959 PCDHAC2Q9Y5I4 1007 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms