RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 TMEM114B3SHH9 223 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 E9PAM4 449 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 MATN2O00339 956 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 POLBP06746 335 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 ATF6P18850 670 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 SERPINB8P50452 374 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 TBX4P57082 545 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 NRF1Q16656 503 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 ACVR1CQ8NER5 493 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 DDI1Q8WTU0 396 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 ABTB1Q969K4 478 aaPredicted RBP18.47■□□□□ 0.55
TRAF3-203ENST00000392745 SLC39A8Q9C0K1 460 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 WDR41Q9HAD4 459 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 DFFAO00273 331 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 JCHAINP01591 159 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 CCDC166P0CW27 439 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 NELFEP18615 380 aaKnown RBP18.47■□□□□ 0.55
TRAF3-203ENST00000392745 ITGB8P26012 769 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 PGGT1BP53609 377 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 CNKSR3Q6P9H4 555 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 MIB1Q86YT6 1006 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 RNF168Q8IYW5 571 aaPredicted RBP18.47■□□□□ 0.55
TRAF3-203ENST00000392745 PDCD6IPQ8WUM4 868 aaKnown RBP18.47■□□□□ 0.55
TRAF3-203ENST00000392745 TMIGD2Q96BF3 282 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 IGSF21Q96ID5 467 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 ZNF512Q96ME7 567 aaPredicted RBP18.47■□□□□ 0.55
TRAF3-203ENST00000392745 ILKAPQ9H0C8 392 aaPredicted RBP18.47■□□□□ 0.55
TRAF3-203ENST00000392745 LIN28AQ9H9Z2 209 aaKnown RBP18.47■□□□□ 0.55
TRAF3-203ENST00000392745 WBP1LQ9NX94 342 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 VPS28Q9UK41 221 aa18.47■□□□□ 0.55
TRAF3-203ENST00000392745 KIAA0100Q14667 2235 aaKnown RBP18.46■□□□□ 0.55
TRAF3-203ENST00000392745 NYNRINQ9P2P1 1898 aaKnown RBP18.46■□□□□ 0.55
TRAF3-203ENST00000392745 MAGEB3O15480 346 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 ZSCAN9O15535 394 aaPredicted RBP18.46■□□□□ 0.55
TRAF3-203ENST00000392745 JUNP05412 331 aaKnown RBP18.46■□□□□ 0.55
TRAF3-203ENST00000392745 ME2P23368 584 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 OR1D2P34982 312 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 CREB5Q02930 508 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 SMARCB1Q12824 385 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 SLC8B1Q6J4K2 584 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 BORAQ6PGQ7 559 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 PGAM4Q8N0Y7 254 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 CNTD1Q8N815 330 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 GRIN3AQ8TCU5 1115 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 ISL2Q96A47 359 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 C1orf74Q96LT6 269 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 CATSPERBQ9H7T0 1116 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 NMRAL1Q9HBL8 299 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 TLR8Q9NR97 1041 aaKnown RBP18.46■□□□□ 0.55
TRAF3-203ENST00000392745 RNF11Q9Y3C5 154 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 C7orf72A4D263 438 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 USP12O75317 370 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 BCAS2O75934 225 aaPredicted RBP18.46■□□□□ 0.55
TRAF3-203ENST00000392745 CAPNS1P04632 268 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 SPRP35270 261 aaPredicted RBP18.46■□□□□ 0.55
TRAF3-203ENST00000392745 LIMK2P53671 638 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 TMED1Q13445 227 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 DCTN2Q13561 401 aaKnown RBP18.46■□□□□ 0.55
TRAF3-203ENST00000392745 PSMD5Q16401 504 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 CLEC14AQ86T13 490 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 OR52K1Q8NGK4 314 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 ZNF669Q96BR6 464 aaPredicted RBP18.46■□□□□ 0.55
TRAF3-203ENST00000392745 ZNF419Q96HQ0 510 aaPredicted RBP18.46■□□□□ 0.55
TRAF3-203ENST00000392745 TEKT5Q96M29 485 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 SEMA6AQ9H2E6 1030 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 MTRRQ9UBK8 725 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 VANGL2Q9ULK5 521 aa18.46■□□□□ 0.55
TRAF3-203ENST00000392745 MAGED2Q9UNF1 606 aaPredicted RBP18.46■□□□□ 0.55
TRAF3-203ENST00000392745 ACOT8O14734 319 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 HDAC3O15379 428 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 FGF10O15520 208 aaPredicted RBP18.45■□□□□ 0.54
TRAF3-203ENST00000392745 MTSS1O43312 755 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 GRID2O43424 1007 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 C2P06681 752 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 ZNF26P17031 533 aaPredicted RBP18.45■□□□□ 0.54
TRAF3-203ENST00000392745 PSMC3P17980 439 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 HTR7P34969 479 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 PPARGP37231 505 aaPredicted RBP18.45■□□□□ 0.54
TRAF3-203ENST00000392745 COG7P83436 770 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 C10orf120Q5SQS8 335 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 IL23RQ5VWK5 629 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 SEL1L3Q68CR1 1132 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 NXNQ6DKJ4 435 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 FAM117BQ6P1L5 589 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 DUS1LQ6P1R4 473 aaKnown RBP18.45■□□□□ 0.54
TRAF3-203ENST00000392745 PTAR1Q7Z6K3 402 aaPredicted RBP18.45■□□□□ 0.54
TRAF3-203ENST00000392745 ZNF683Q8IZ20 524 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 TOP1MTQ969P6 601 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 TMA16Q96EY4 203 aaKnown RBP18.45■□□□□ 0.54
TRAF3-203ENST00000392745 NPAS2Q99743 824 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 MLPHQ9BV36 600 aaPredicted RBP18.45■□□□□ 0.54
TRAF3-203ENST00000392745 CCSER2Q9H7U1 834 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 ZDHHC2Q9UIJ5 367 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 SLC38A8A6NNN8 435 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 TK2O00142 265 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 PIGNO95427 931 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 IMPDH2P12268 514 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 NFKB1P19838 968 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 HSPA13P48723 471 aa18.45■□□□□ 0.54
TRAF3-203ENST00000392745 RPL14P50914 215 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms