RNA–Protein interactions for RNA: ENST00000392244.7

SUMO1-201, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 2 BASIC

Gene SUMO1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-201ENST00000392244 LYSMD1Q96S90 227 aa16.7■□□□□ 0.26
SUMO1-201ENST00000392244 SRPK1Q96SB4 655 aaKnown RBP16.7■□□□□ 0.26
SUMO1-201ENST00000392244 ARNT2Q9HBZ2 717 aa16.7■□□□□ 0.26
SUMO1-201ENST00000392244 MBD1Q9UIS9 605 aaPredicted RBP16.7■□□□□ 0.26
SUMO1-201ENST00000392244 NUMA1Q14980 2115 aa16.7■□□□□ 0.26
SUMO1-201ENST00000392244 MYLKQ15746 1914 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 C10orf142B7Z368 130 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 DNALI1O14645 258 aaPredicted RBP16.69■□□□□ 0.26
SUMO1-201ENST00000392244 RPP40O75818 363 aaKnown RBP16.69■□□□□ 0.26
SUMO1-201ENST00000392244 PRKCGP05129 697 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 CTPS1P17812 591 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 IVDP26440 423 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 VIPR1P32241 457 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 CHRNA4P43681 627 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 FAM193AP78312 1265 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 RALGDSQ12967 914 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 SPARCL1Q14515 664 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 TMEM52BQ4KMG9 183 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 DENND5AQ6IQ26 1287 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 PCGF5Q86SE9 256 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 SLC25A41Q8N5S1 370 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 NOA1Q8NC60 698 aaKnown RBP16.69■□□□□ 0.26
SUMO1-201ENST00000392244 CPT1BQ92523 772 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 RAB17Q9H0T7 212 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 PCED1AQ9H1Q7 454 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 B4GALT6Q9UBX8 382 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 GGT7Q9UJ14 662 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 TPX2Q9ULW0 747 aaKnown RBP16.69■□□□□ 0.26
SUMO1-201ENST00000392244 ITM2BQ9Y287 266 aa16.69■□□□□ 0.26
SUMO1-201ENST00000392244 SCN8AQ9UQD0 1980 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 NPIPB15A6NHN6 443 aaPredicted RBP16.68■□□□□ 0.26
SUMO1-201ENST00000392244 EFCAB8A8MWE9 144 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 H0Y858 1186 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 NEMP1O14524 444 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 LILRB5O75023 590 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 NDUFS2O75306 463 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 USP12O75317 370 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 ALPIP09923 528 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 ITIH2P19823 946 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 HNF1BP35680 557 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 OLIG2Q13516 323 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 SYCP2LQ5T4T6 812 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 RNASEH2BQ5TBB1 312 aaKnown RBP16.68■□□□□ 0.26
SUMO1-201ENST00000392244 KIAA1161Q6NSJ0 714 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 HOOK3Q86VS8 718 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 TRIM69Q86WT6 500 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 PPIL6Q8IXY8 311 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 SNF8Q96H20 258 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 APOL2Q9BQE5 337 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 ERP44Q9BS26 406 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 LRRC1Q9BTT6 524 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 GPR174Q9BXC1 333 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 MAGEE1Q9HCI5 957 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 INVSQ9Y283 1065 aa16.68■□□□□ 0.26
SUMO1-201ENST00000392244 TBC1D3DA0A087WVF3 549 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 TBC1D3IA0A087WXS9 549 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 TBC1D3EA0A087X179 549 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 TBC1D3KA0A087X1G2 549 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 TCRBV7S3A2A0A539 114 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 TBC1D3FA6NER0 549 aaPredicted RBP16.67■□□□□ 0.26
SUMO1-201ENST00000392244 TBC1D3LB9A6J9 549 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 NDC80O14777 642 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 HRO43593 1189 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 TMEM63AO94886 807 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 TBC1D3HP0C7X1 549 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 ZNF30P17039 623 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 BCKDHBP21953 392 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 LHCGRP22888 699 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 MRPS25P82663 173 aaKnown RBP16.67■□□□□ 0.26
SUMO1-201ENST00000392244 RPL6Q02878 288 aaKnown RBP16.67■□□□□ 0.26
SUMO1-201ENST00000392244 CDH17Q12864 832 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 GLE1Q53GS7 698 aaKnown RBP16.67■□□□□ 0.26
SUMO1-201ENST00000392244 IZUMO3Q5VZ72 239 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 KIAA0895LQ68EN5 471 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 TBC1D3GQ6DHY5 549 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 TBC1D3CQ6IPX1 549 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 PPP1R21Q6ZMI0 780 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 TBC1D3Q8IZP1 549 aaPredicted RBP16.67■□□□□ 0.26
SUMO1-201ENST00000392244 NAT8LQ8N9F0 302 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 PRSS33Q8NF86 280 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 CADM4Q8NFZ8 388 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 CXorf40AQ8TE69 158 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 SMIM14Q96QK8 99 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 KCNH6Q9H252 994 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 CASS4Q9NQ75 786 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 HACD3Q9P035 362 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 UTP11Q9Y3A2 253 aaKnown RBP16.67■□□□□ 0.26
SUMO1-201ENST00000392244 TNRC6BQ9UPQ9 1833 aaKnown RBP16.67■□□□□ 0.26
SUMO1-201ENST00000392244 THADAQ6YHU6 1953 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 PLXNA2O75051 1894 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 TRPM6Q9BX84 2022 aa16.67■□□□□ 0.26
SUMO1-201ENST00000392244 FAM47DPA6NHR8 397 aa16.66■□□□□ 0.26
SUMO1-201ENST00000392244 SMAPO00193 183 aa16.66■□□□□ 0.26
SUMO1-201ENST00000392244 AP3B1O00203 1094 aa16.66■□□□□ 0.26
SUMO1-201ENST00000392244 PSMD11O00231 422 aa16.66■□□□□ 0.26
SUMO1-201ENST00000392244 MAP3K13O43283 966 aa16.66■□□□□ 0.26
SUMO1-201ENST00000392244 RNGTTO60942 597 aaKnown RBP16.66■□□□□ 0.26
SUMO1-201ENST00000392244 SEC31AO94979 1220 aaKnown RBP16.66■□□□□ 0.26
SUMO1-201ENST00000392244 HEXIM1O94992 359 aaKnown RBP16.66■□□□□ 0.26
SUMO1-201ENST00000392244 PCDH8O95206 1070 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms