RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 TAF1BQ53T94 588 aaPredicted RBP11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 SLC41A1Q8IVJ1 513 aa11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 PLD6Q8N2A8 252 aaKnown RBP11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 OR13C4Q8NGS5 318 aa11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 ING5Q8WYH8 240 aa11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 E2F7Q96AV8 911 aa11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 BBS2Q9BXC9 721 aa11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 PBX4Q9BYU1 374 aa11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 TM6SF2Q9BZW4 377 aa11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 CERS4Q9HA82 394 aa11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 FBXO6Q9NRD1 293 aaPredicted RBP11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 HACD3Q9P035 362 aa11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 TLK1Q9UKI8 766 aa11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 HS3ST2Q9Y278 367 aa11.49□□□□□ -0.57
SMARCAL1-203ENST00000392128 CCDC162PA2VCL2 907 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 CCL22O00626 93 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 AURKAO14965 403 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 ZNF821O75541 412 aaPredicted RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 KIAA0754O94854 1291 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 GLP2RO95838 553 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 IGSF6O95976 241 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 GOT2P00505 430 aaKnown RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 SLC35E2BP0CK96 405 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 STMN1P16949 149 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 OGNP20774 298 aaKnown RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 CRABP2P29373 138 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 GRIA4P48058 902 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 NRIP1P48552 1158 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 RPL26P61254 145 aaKnown RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 IRF9Q00978 393 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 KCNC3Q14003 757 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 FASTKD1Q53R41 847 aaKnown RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 CNSTQ6PJW8 725 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 RAPH1Q70E73 1250 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 ADGRG2Q8IZP9 1017 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 OTUD6BQ8N6M0 293 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 CELF5Q8N6W0 485 aaKnown RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 ITFG1Q8TB96 612 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 SCG3Q8WXD2 468 aaKnown RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 ISG20Q96AZ6 181 aaKnown RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 CDKN2AIPNLQ96HQ2 116 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 C1QTNF1Q9BXJ1 281 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 LINC00597Q9H2U6 94 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 SFXN1Q9H9B4 322 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 KLHL14Q9P2G3 628 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 RPL26L1Q9UNX3 145 aaKnown RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 CD3EAPO15446 510 aaKnown RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 HTRA2O43464 458 aaPredicted RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 BUD23O43709 281 aaKnown RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 SOCS5O75159 536 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 PGLSO95336 258 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 TGDSO95455 350 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 S1PR4O95977 384 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 PABPC1P11940 636 aaKnown RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 SRCP12931 536 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 TYRP14679 529 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 LPOP22079 712 aaPredicted RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 TMPRSS15P98073 1019 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 SF3A3Q12874 501 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 DMC1Q14565 340 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 PTPRCAPQ14761 206 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 CBX2Q14781 532 aaPredicted RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 PCLAFQ15004 111 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 CHI3L2Q15782 390 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 ZNF789Q5FWF6 425 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 LY6G5CQ5SRR4 150 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 ARMC12Q5T9G4 340 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 ASTLQ6HA08 431 aaPredicted RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 MRNIPQ6NTE8 343 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 GPATCH11Q8N954 259 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 OR4L1Q8NH43 312 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 PDCD6IPQ8WUM4 868 aaKnown RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 MYO19Q96H55 970 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 ELMO2Q96JJ3 720 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 C7orf26Q96N11 449 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 OMDQ99983 421 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 SUDS3Q9H7L9 328 aaPredicted RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 ZNF358Q9NW07 568 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 MARCH4Q9P2E8 410 aaPredicted RBP11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 COPG2Q9UBF2 871 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 PCDHB9Q9Y5E1 797 aa11.48□□□□□ -0.57
SMARCAL1-203ENST00000392128 A0A087X1B8 175 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 OR51F1A6NGY5 319 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 CCT8L1PA6NM43 557 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 TRAFD1O14545 582 aaPredicted RBP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 PHGDHO43175 533 aaKnown RBP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 APOA4P06727 396 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 ALDH3A1P30838 453 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 SLC8A1P32418 973 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 GMPRP36959 345 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 CTSOP43234 321 aaPredicted RBP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 IRX4P78413 519 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 SULT2A1Q06520 285 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 BCL2L1Q07817 233 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 BST1Q10588 318 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 TYSND1Q2T9J0 566 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 DGKKQ5KSL6 1271 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms