RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 PARGQ86W56 976 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 EID2Q8N6I1 236 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 PNPLA1Q8N8W4 532 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 ARRDC2Q8TBH0 407 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 NSMCE1Q8WV22 266 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 PIH1D2Q8WWB5 315 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 OLFM3Q96PB7 478 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 MCCC1Q96RQ3 725 aaPredicted RBP11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 IL12RB2Q99665 862 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 C1QTNF7Q9BXJ2 289 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 NT5MQ9NPB1 228 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 SCUBE2Q9NQ36 999 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 UCKL1Q9NWZ5 548 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 DDX56Q9NY93 547 aaKnown RBP11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 PHTF1Q9UMS5 762 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 COQ6Q9Y2Z9 468 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 MSRB2Q9Y3D2 182 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 PCDHGA1Q9Y5H4 931 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 URB1O60287 2271 aaKnown RBP11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 CHD6Q8TD26 2715 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 KIF26BQ2KJY2 2108 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 CELSR3Q9NYQ7 3312 aa11.45□□□□□ -0.58
IGHV4-28-201ENST00000390612 BTNL10A8MVZ5 291 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 ENC1O14682 589 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 PJA2O43164 708 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 PSTPIP1O43586 416 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 LDOC1O95751 146 aaPredicted RBP11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 PRLP01236 227 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 CAPNS1P04632 268 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 C1SP09871 688 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 TRIM23P36406 574 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 HNRNPKP61978 463 aaKnown RBP eCLIP11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 IFI35P80217 286 aaPredicted RBP11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 NIPAL4Q0D2K0 466 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 ZNF211Q13398 564 aaPredicted RBP11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 IRF4Q15306 451 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 SPA17Q15506 151 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 CFAP58Q5T655 872 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 C11orf63Q6NUN7 778 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 TMPRSS7Q7RTY8 843 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 KATNAL2Q8IYT4 538 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 CNTD1Q8N815 330 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 OR4C6Q8NH72 309 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 TPCN2Q8NHX9 752 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 LRRN4Q8WUT4 740 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 SCRN2Q96FV2 425 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 CNDP2Q96KP4 475 aaKnown RBP11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 TBATAQ96M53 351 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 COQ10AQ96MF6 247 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 LGMNQ99538 433 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 SEMA3CQ99985 751 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 POLR1EQ9GZS1 481 aaKnown RBP11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 GOLPH3Q9H4A6 298 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 RBM22Q9NW64 420 aaKnown RBP eCLIP11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 B4GALT6Q9UBX8 382 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 FTSJ1Q9UET6 329 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 KLK13Q9UKR3 277 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 CSNK1G3Q9Y6M4 447 aa11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 COL27A1Q8IZC6 1860 aaPredicted RBP11.44□□□□□ -0.58
IGHV4-28-201ENST00000390612 LY6G6EA0A0G2JKS1 128 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 SCAMP1O15126 338 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 SIGLEC6O43699 453 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 SPOPO43791 374 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 SDC3O75056 442 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 RECQL5O94762 991 aaPredicted RBP11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 HEXIM1O94992 359 aaKnown RBP11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 CPP00450 1065 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 KRT1P04264 644 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 HLA-DQB2P05538 268 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 MMP2P08253 660 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 PDHA1P08559 390 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 HOXC4P09017 264 aaPredicted RBP11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 ZFXP17010 805 aaPredicted RBP11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 VIPR1P32241 457 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 NOP2P46087 812 aaKnown RBP11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 ACADVLP49748 655 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 DSC2Q02487 901 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 ADCY2Q08462 1091 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 MTM1Q13496 603 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 PDE1CQ14123 709 aaPredicted RBP11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 PTK2BQ14289 1009 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 SMAD1Q15797 465 aaKnown RBP11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 CNGA3Q16281 694 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 ZNF542PQ5EBM4 170 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 NPNTQ6UXI9 565 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 CCNI2Q6ZMN8 369 aaPredicted RBP11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 MACC1Q6ZN28 852 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 CCDC13Q8IYE1 715 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 FAM181AQ8N9Y4 354 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 RNF25Q96BH1 459 aaPredicted RBP11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 TADA1Q96BN2 335 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 CALR3Q96L12 384 aaKnown RBP11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 APOOQ9BUR5 198 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 LACRTQ9GZZ8 138 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 BRD8Q9H0E9 1235 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 LUC7LQ9NQ29 371 aaKnown RBP11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 IMPACTQ9P2X3 320 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 RAI2Q9Y5P3 530 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 DUSP10Q9Y6W6 482 aa11.43□□□□□ -0.58
IGHV4-28-201ENST00000390612 U3KQA8 63 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms