RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 FMR1NBQ8N0W7 255 aaPredicted RBP11.88□□□□□ -0.51
SOD1-202ENST00000389995 PATE1Q8WXA2 126 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 SMARCE1Q969G3 411 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 PGAP3Q96FM1 320 aaPredicted RBP11.88□□□□□ -0.51
SOD1-202ENST00000389995 CYP4F12Q9HCS2 524 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 PCDH12Q9NPG4 1184 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 OCIAD1Q9NX40 245 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 AKAP7Q9P0M2 348 aaPredicted RBP11.88□□□□□ -0.51
SOD1-202ENST00000389995 TMEM9Q9P0T7 183 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.88□□□□□ -0.51
SOD1-202ENST00000389995 CSMD1Q96PZ7 3565 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 ZNF106Q9H2Y7 1883 aaKnown RBP11.88□□□□□ -0.51
SOD1-202ENST00000389995 PRR19A6NJB7 356 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 ZNF891A8MT65 544 aaPredicted RBP11.87□□□□□ -0.51
SOD1-202ENST00000389995 GOLGA8SH3BPF8 625 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 BUB1O43683 1085 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 NUDT21O43809 227 aaKnown RBP11.87□□□□□ -0.51
SOD1-202ENST00000389995 RAD1O60671 282 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 F9P00740 461 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 RNF224P0DH78 156 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 XPAP23025 273 aaPredicted RBP11.87□□□□□ -0.51
SOD1-202ENST00000389995 CD1CP29017 333 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 KRT9P35527 623 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 ATP11AP98196 1134 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 ANKS6Q68DC2 871 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 TRIM65Q6PJ69 517 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 NLRP14Q86W24 1093 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 PELI3Q8N2H9 469 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 OR56A4Q8NGH8 313 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 NELFBQ8WX92 580 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 HMCESQ96FZ2 354 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 DHTKD1Q96HY7 919 aaPredicted RBP11.87□□□□□ -0.51
SOD1-202ENST00000389995 GDAP1L1Q96MZ0 367 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 HAPLN3Q96S86 360 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 CTRCQ99895 268 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 LGR4Q9BXB1 951 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 TTYH3Q9C0H2 523 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 SLC39A1Q9NY26 324 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 RRN3Q9NYV6 651 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 HPCAL4Q9UM19 191 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 CTNND2Q9UQB3 1225 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 TP53TG5Q9Y2B4 290 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 DGKBQ9Y6T7 804 aa11.87□□□□□ -0.51
SOD1-202ENST00000389995 LOC101059948A0A1B0GTJ6 334 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 A1L4Q6 167 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 RHPN2P1A8MT19 583 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 KDELR3O43731 214 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 SMC2O95347 1197 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 IGSF6O95976 241 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 BMP6P22004 513 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 CSF2RBP32927 897 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 CLCN1P35523 988 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 RHOAP61586 193 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 CDC20Q12834 499 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 STIM1Q13586 685 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 CDO1Q16878 200 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 LACTB2Q53H82 288 aaPredicted RBP11.86□□□□□ -0.51
SOD1-202ENST00000389995 ZSWIM9Q86XI8 627 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 FAM129CQ86XR2 697 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 XYLT1Q86Y38 959 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 NRSN1Q8IZ57 195 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 EMC1Q8N766 993 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 SHC3Q92529 594 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 B3GNT4Q9C0J1 378 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 CDH19Q9H159 772 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 GPN2Q9H9Y4 310 aaPredicted RBP11.86□□□□□ -0.51
SOD1-202ENST00000389995 PPARGC1AQ9UBK2 798 aaKnown RBP11.86□□□□□ -0.51
SOD1-202ENST00000389995 DKK3Q9UBP4 350 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 OR12D3Q9UGF7 316 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 MAN1B1Q9UKM7 699 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 NEU3Q9UQ49 428 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 PCDHGA3Q9Y5H0 932 aa11.86□□□□□ -0.51
SOD1-202ENST00000389995 POLQO75417 2590 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 EFCAB7A8K855 629 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 A8MX80 341 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 PPP1R3GB7ZBB8 358 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 HGSO14964 777 aaPredicted RBP11.85□□□□□ -0.51
SOD1-202ENST00000389995 TEX33O43247 280 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 AGFG2O95081 481 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 ECEL1O95672 775 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 FGF1P05230 155 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 GNLYP22749 145 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 AK4P27144 223 aaPredicted RBP11.85□□□□□ -0.51
SOD1-202ENST00000389995 CD97P48960 835 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 LIMK2P53671 638 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 PTK2Q05397 1052 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 ELP6Q0PNE2 266 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 MTM1Q13496 603 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 UGP2Q16851 508 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 C15orf59Q2T9L4 293 aaPredicted RBP11.85□□□□□ -0.51
SOD1-202ENST00000389995 MANEALQ5VSG8 457 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 C16orf46Q6P387 395 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 ENOSF1Q7L5Y1 443 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 TIPARPQ7Z3E1 657 aaKnown RBP11.85□□□□□ -0.51
SOD1-202ENST00000389995 BNIPLQ7Z465 357 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 ATCAYQ86WG3 371 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 NRROSQ86YC3 692 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 CREBRFQ8IUR6 639 aa11.85□□□□□ -0.51
SOD1-202ENST00000389995 ATL2Q8NHH9 583 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms