RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 DYDC1Q8WWB3 177 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 PTPRN2Q92932 1015 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 VOPP1Q96AW1 172 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 FAM83CQ9BQN1 747 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 CIPCQ9C0C6 399 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 TTYH1Q9H313 450 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 PRO3102Q9H379 93 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 MTG2Q9H4K7 406 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 CAB39LQ9H9S4 337 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 ZFP14Q9HCL3 533 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 HPS4Q9NQG7 708 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 HECAQ9UBI9 543 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 SMG5Q9UPR3 1016 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 TRIOO75962 3097 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 EBAG9O00559 213 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 FZD6O60353 706 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 PAPSS2O95340 614 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 AHSGP02765 367 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 ALPIP09923 528 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 POLR2EP19388 210 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 EPHB1P54762 984 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 BCL2L1Q07817 233 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 GRIN2CQ14957 1233 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 GAB4Q2WGN9 574 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 ZNF789Q5FWF6 425 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 CES5AQ6NT32 575 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 NEPROQ6NW34 567 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 GLT6D1Q7Z4J2 308 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 KIAA0907Q7Z7F0 614 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 CMC1Q7Z7K0 106 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 SFTPA1Q8IWL2 248 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 AHI1Q8N157 1196 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 OTUD6BQ8N6M0 293 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 PAF1Q8N7H5 531 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 ZNF366Q8N895 744 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 MTBPQ96DY7 904 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 MYO19Q96H55 970 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 RPP25Q9BUL9 199 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 ADGRE3Q9BY15 652 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 ECT2Q9H8V3 914 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 FBXO10Q9UK96 956 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 ERVW-1Q9UQF0 538 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 TTC34A8MYJ7 566 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 TRAFD1O14545 582 aaPredicted RBP12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 HOXC11O43248 304 aaPredicted RBP12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 PGLSO95336 258 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 HOXB8P17481 243 aaPredicted RBP12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 SAT1P21673 171 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 CNTFP26441 200 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 SPRP35270 261 aaPredicted RBP12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 LTBRP36941 435 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 LIMK2P53671 638 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 SNRPD1P62314 119 aaKnown RBP12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 PRAMEP78395 509 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 SEMG2Q02383 582 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 ADGRE1Q14246 886 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 PPM1JQ5JR12 505 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 ARMC12Q5T9G4 340 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 PARM1Q6UWI2 310 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 DPY19L3Q6ZPD9 716 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 ZSWIM9Q86XI8 627 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 SPNS2Q8IVW8 549 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 NDUFAF2Q8N183 169 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 MICALL1Q8N3F8 863 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 CHST14Q8NCH0 376 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 OR4K2Q8NGD2 314 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 FGF14Q92915 247 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 NXPE3Q969Y0 559 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 CENPTQ96BT3 561 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 APOPT1Q96IL0 206 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 VPS39Q96JC1 886 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 MCMBPQ9BTE3 642 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 SLC2A11Q9BYW1 496 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 ZDHHC6Q9H6R6 413 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 TRPV4Q9HBA0 871 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 BPIFA1Q9NP55 256 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 FBXO6Q9NRD1 293 aaPredicted RBP12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 GTSE1Q9NYZ3 720 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 MARCH4Q9P2E8 410 aaPredicted RBP12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 FNDC3AQ9Y2H6 1198 aaKnown RBP12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 ATG2BQ96BY7 2078 aa12.24□□□□□ -0.45
SPTBN1-203ENST00000389980 A8MX80 341 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 COPEO14579 308 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 HAUS5O94927 633 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 NFATC1O95644 943 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 FAM107AO95990 144 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 PRSS56P0CW18 603 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 CCNHP51946 323 aaPredicted RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 KDSRQ06136 332 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 SULT2A1Q06520 285 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 DMC1Q14565 340 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 GRM3Q14832 879 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 MYLK3Q32MK0 819 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 LVRNQ6Q4G3 990 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 ZC3HC1Q86WB0 502 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 CNTN4Q8IWV2 1026 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 ETFBKMTQ8IXQ9 262 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 PIH1D2Q8WWB5 315 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 MRGPRX3Q96LB0 322 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms