RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 ISM2Q6H9L7 571 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 GJB7Q6PEY0 223 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 SLC26A9Q7LBE3 791 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 PHLDB2Q86SQ0 1253 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 FAM131BQ86XD5 332 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 CCDC13Q8IYE1 715 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 PAF1Q8N7H5 531 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 CPT1CQ8TCG5 803 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 PATE1Q8WXA2 126 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 STARD8Q92502 1023 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 FUBP1Q96AE4 644 aaKnown RBP9.7□□□□□ -0.86
IFT88-203ENST00000389373 GDAP1L1Q96MZ0 367 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 TTYH3Q9C0H2 523 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 PCDH12Q9NPG4 1184 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 PLCB1Q9NQ66 1216 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 NDFIP2Q9NV92 336 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 RMND1Q9NWS8 449 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 TMEM9Q9P0T7 183 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 PILRAQ9UKJ1 303 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 RELNP78509 3460 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 FGF1P05230 155 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 KELP23276 732 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 AK4P27144 223 aaPredicted RBP9.69□□□□□ -0.86
IFT88-203ENST00000389373 KRT9P35527 623 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 DCTP40126 519 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 RAB15P59190 212 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 LRRC63Q05C16 580 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 PKP1Q13835 747 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 ERV3-1Q14264 604 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 PTPN20Q4JDL3 420 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 CFAP58Q5T655 872 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 ACBD5Q5T8D3 534 aaPredicted RBP9.69□□□□□ -0.86
IFT88-203ENST00000389373 TCTN3Q6NUS6 607 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 ERAP2Q6P179 960 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 SLC30A9Q6PML9 568 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 TIPARPQ7Z3E1 657 aaKnown RBP9.69□□□□□ -0.86
IFT88-203ENST00000389373 GALNT11Q8NCW6 608 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 ZNF397Q8NF99 534 aaPredicted RBP9.69□□□□□ -0.86
IFT88-203ENST00000389373 OR4D9Q8NGE8 314 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 VOPP1Q96AW1 172 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 RTP4Q96DX8 246 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 CCDC34Q96HJ3 373 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 AHCYL2Q96HN2 611 aaKnown RBP9.69□□□□□ -0.86
IFT88-203ENST00000389373 EXOC2Q96KP1 924 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 GOLPH3LQ9H4A5 285 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 CARS2Q9HA77 564 aaKnown RBP9.69□□□□□ -0.86
IFT88-203ENST00000389373 DKK3Q9UBP4 350 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 ZNF212Q9UDV6 495 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 TLN1Q9Y490 2541 aaKnown RBP9.69□□□□□ -0.86
IFT88-203ENST00000389373 PCDHB3Q9Y5E6 796 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 KCNMB2Q9Y691 235 aa9.69□□□□□ -0.86
IFT88-203ENST00000389373 FLNCQ14315 2725 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 TRBV23OR9-2A0A075B6M9 112 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 PRSS38A1L453 326 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 BECN2A8MW95 431 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 A8MX80 341 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 GOLGA8SH3BPF8 625 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 PPM1DO15297 605 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 RAMP2O60895 175 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 KATNA1O75449 491 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 KRT38O76015 456 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 RECQL5O94762 991 aaPredicted RBP9.68□□□□□ -0.86
IFT88-203ENST00000389373 STK17BO94768 372 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 THRAP10827 490 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 CCNB1P14635 433 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 POU3F2P20265 443 aaPredicted RBP9.68□□□□□ -0.86
IFT88-203ENST00000389373 TNFRSF8P28908 595 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 KIAA1024LP59773 190 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 ABHD18Q0P651 414 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 ILF3Q12906 894 aaKnown RBP eCLIP9.68□□□□□ -0.86
IFT88-203ENST00000389373 CLPPQ16740 277 aaPredicted RBP9.68□□□□□ -0.86
IFT88-203ENST00000389373 UGP2Q16851 508 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 TSR1Q2NL82 804 aaKnown RBP9.68□□□□□ -0.86
IFT88-203ENST00000389373 EIF2S3LQ2VIR3 472 aaKnown RBP9.68□□□□□ -0.86
IFT88-203ENST00000389373 SLC25A52Q3SY17 297 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 ARTNQ5T4W7 220 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 FAM102AQ5T9C2 384 aaPredicted RBP9.68□□□□□ -0.86
IFT88-203ENST00000389373 KLHL10Q6JEL2 608 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 CEACAM20Q6UY09 585 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 MAMDC2Q7Z304 686 aaPredicted RBP9.68□□□□□ -0.86
IFT88-203ENST00000389373 ZNF761Q86XN6 746 aaPredicted RBP9.68□□□□□ -0.86
IFT88-203ENST00000389373 PGAP3Q96FM1 320 aaPredicted RBP9.68□□□□□ -0.86
IFT88-203ENST00000389373 CFAP57Q96MR6 1250 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 CEP63Q96MT8 703 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 LGR4Q9BXB1 951 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 GSDMCQ9BYG8 508 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 MAGEH1Q9H213 219 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 PDCL3Q9H2J4 239 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 APMAPQ9HDC9 416 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 TAAR2Q9P1P5 351 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 MAP10Q9P2G4 905 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 PPARGC1AQ9UBK2 798 aaKnown RBP9.68□□□□□ -0.86
IFT88-203ENST00000389373 TLK1Q9UKI8 766 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 KCTD3Q9Y597 815 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 ICE1Q9Y2F5 2266 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 CHD5Q8TDI0 1954 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 UNC79Q9P2D8 2635 aa9.68□□□□□ -0.86
IFT88-203ENST00000389373 CACNA1DQ01668 2161 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 IGHV1OR21-1A0A087WYE8 117 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 B4E171 279 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms