RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 CBSP35520 551 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 HMGA2P52926 109 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 PMS2P54278 862 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 P2RX3P56373 397 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 CRYMQ14894 314 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 DUSP6Q16828 381 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 TCTN1Q2MV58 587 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 RAB41Q5JT25 222 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 TRILQ7L0X0 811 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 LINC00346Q8IVM7 164 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 RPAP2Q8IXW5 612 aaPredicted RBP4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 TEX45Q8NA69 505 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 HJURPQ8NCD3 748 aaPredicted RBP4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 ARRDC2Q8TBH0 407 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 NELL1Q92832 810 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 APOLD1Q96LR9 279 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 SH2D4AQ9H788 454 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 PDE7BQ9NP56 450 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 CYSLTR2Q9NS75 346 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 SETD4Q9NVD3 440 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 NKIRAS2Q9NYR9 191 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 SUCLA2Q9P2R7 463 aaPredicted RBP4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 FBXL17Q9UF56 701 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 NENFQ9UMX5 172 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 NFE2L3Q9Y4A8 694 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 RAI2Q9Y5P3 530 aa4.71□□□□□ -1.66
RNU6-549P-201ENST00000384433 C1orf226A1L170 272 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 SYNDIG1LA6NDD5 238 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 J3KR12 359 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 CHL1O00533 1208 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 KIF1CO43896 1103 aaKnown RBP4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 ENTPD3O75355 529 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 EPN2O95208 641 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 IFNA2P01563 188 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 RB1P06400 928 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 MMP2P08253 660 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 CYC1P08574 325 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 PRF1P14222 555 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 GALCP54803 685 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 STK4Q13043 487 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 NAE1Q13564 534 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 RBMS2Q15434 407 aaKnown RBP4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 ZNF284Q2VY69 593 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 MMEL1Q495T6 779 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 MTX3Q5HYI7 312 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 WASHC2DQ5SRD0 308 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 LRIF1Q5T3J3 769 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 TMEM198Q66K66 360 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 JADE1Q6IE81 842 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 SHC4Q6S5L8 630 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 GLDNQ6ZMI3 551 aaPredicted RBP4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 MB21D2Q8IYB1 491 aaPredicted RBP4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 PRSS3P2Q8NHM4 247 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 IGSF8Q969P0 613 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 FBXL8Q96CD0 374 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 ARHGEF26Q96DR7 871 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 ZNF333Q96JL9 665 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 ZFYVE19Q96K21 471 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 KCNN2Q9H2S1 579 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 SIRT3Q9NTG7 399 aaPredicted RBP4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 TRNAU1APQ9NX07 287 aaKnown RBP4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 CISD1Q9NZ45 108 aaKnown RBP4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 FRMD4BQ9Y2L6 1034 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 SNX8Q9Y5X2 465 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 UTYO14607 1347 aa4.7□□□□□ -1.66
RNU6-549P-201ENST00000384433 TTC36A6NLP5 189 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 A8MV72 311 aaPredicted RBP4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 TSPAN9O75954 239 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 FTCDO95954 541 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 DNTTP04053 509 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 HSP90AA1P07900 732 aaKnown RBP4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 HOXB5P09067 269 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 EIF2DP41214 584 aaKnown RBP4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 PRAMEP78395 509 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 SSBP2P81877 361 aaPredicted RBP4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 EPS8Q12929 822 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 ITGADQ13349 1161 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 KLF9Q13886 244 aaPredicted RBP4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 MYBPC2Q14324 1141 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 SRSF7Q16629 238 aaKnown RBP eCLIP4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 Q5PR19 223 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 MFSD4BQ5TF39 518 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 SARM1Q6SZW1 724 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 CFAP77Q6ZQR2 320 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 Q6ZSV7 163 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 GSTA5Q7RTV2 222 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 ZNF367Q7RTV3 350 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 CAMK1DQ8IU85 385 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 TAGAPQ8N103 731 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 C16orf52Q8NHV5 167 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 POMGNT1Q8WZA1 660 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 SLC41A2Q96JW4 573 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 OR2A14Q96R47 310 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 SLF1Q9BQI6 1058 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 ISCUQ9H1K1 167 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 SLC28A3Q9HAS3 691 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 CLK4Q9HAZ1 481 aaKnown RBP4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 ZBTB40Q9NUA8 1239 aa4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 R3HDM2Q9Y2K5 976 aaKnown RBP4.69□□□□□ -1.66
RNU6-549P-201ENST00000384433 TTLL3Q9Y4R7 772 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms