RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 DDX3XO00571 662 aaKnown RBP eCLIP13.07□□□□□ -0.322e-11■■■■■ 31.8
RPAIN-202ENST00000381208 YY2O15391 372 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 SOCS5O75159 536 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 GCATO75600 419 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 TNFP01375 233 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 TSHRP16473 764 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 SERPINB6P35237 376 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 GABREP78334 506 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 NR1I3Q14994 352 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 DPYSL2Q16555 572 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 CA9Q16790 459 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 BROXQ5VW32 411 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 ENPP7Q6UWV6 458 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 CAMK1DQ8IU85 385 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 LRRC49Q8IUZ0 686 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 ARHGAP12Q8IWW6 846 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 SLC35F3Q8IY50 421 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 RBFAQ8N0V3 343 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 ARFGAP1Q8N6T3 406 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 TSEN2Q8NCE0 465 aaKnown RBP13.07□□□□□ -0.32
RPAIN-202ENST00000381208 NSMCE1Q8WV22 266 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 CCDC97Q96F63 343 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-202ENST00000381208 WDR92Q96MX6 357 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 PEBP4Q96S96 227 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 LGMNQ99538 433 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 PRORYQ9H606 182 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 CWC15Q9P013 229 aaKnown RBP13.07□□□□□ -0.32
RPAIN-202ENST00000381208 KLQ9UEF7 1012 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 PADI4Q9UM07 663 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 PCDHB1Q9Y5F3 818 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 PCDHGA8Q9Y5G5 932 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 DGKBQ9Y6T7 804 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 MYLKQ15746 1914 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 IGSF10Q6WRI0 2623 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 A0A1W2PQJ5 194 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 TNFRSF10CO14798 259 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 MUSKO15146 869 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 BUB1BO60566 1050 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-202ENST00000381208 ELFN1P0C7U0 828 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 ITIH2P19823 946 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 TGM2P21980 687 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 RBMS1P29558 406 aaKnown RBP13.06□□□□□ -0.32
RPAIN-202ENST00000381208 SCNN1BP51168 640 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 KIAA1024LP59773 190 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 SRP54P61011 504 aaKnown RBP13.06□□□□□ -0.32
RPAIN-202ENST00000381208 C1orf61Q13536 156 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 COL9A2Q14055 689 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-202ENST00000381208 DPYSQ14117 519 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 ZNF235Q14590 738 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 INPP5AQ14642 412 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 LBRQ14739 615 aaKnown RBP13.06□□□□□ -0.32
RPAIN-202ENST00000381208 TDRD12Q587J7 1177 aaKnown RBP13.06□□□□□ -0.32
RPAIN-202ENST00000381208 CAVIN1Q6NZI2 390 aaKnown RBP13.06□□□□□ -0.32
RPAIN-202ENST00000381208 TMCO3Q6UWJ1 677 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 DPPA4Q7L190 304 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 HID1Q8IV36 788 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 NETO2Q8NC67 525 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 TEKT4Q8WW24 435 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 HIC2Q96JB3 615 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 DPH1Q9BZG8 443 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 HAUS2Q9NVX0 235 aa13.06□□□□□ -0.32
RPAIN-202ENST00000381208 BAHCC1Q9P281 2608 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 TEX51A0A1B0GUA7 166 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 TRAFD1O14545 582 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-202ENST00000381208 RECQL5O94762 991 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-202ENST00000381208 MPOP05164 745 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 PCCBP05166 539 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 MYF5P13349 255 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 KRT10P13645 584 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 ITPKBP27987 946 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 CDH6P55285 790 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 EIF3IQ13347 325 aaKnown RBP13.05□□□□□ -0.32
RPAIN-202ENST00000381208 SPIDRQ14159 915 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 IQCB1Q15051 598 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
RPAIN-202ENST00000381208 ALG11Q2TAA5 492 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 CYP4V2Q6ZWL3 525 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-202ENST00000381208 GPR155Q7Z3F1 870 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 NIPA2Q8N8Q9 360 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 NAP1L5Q96NT1 182 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-202ENST00000381208 RBM15Q96T37 977 aaKnown RBP eCLIP13.05□□□□□ -0.32
RPAIN-202ENST00000381208 TRIM7Q9C029 511 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 CLPBQ9H078 707 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 TCEAL2Q9H3H9 227 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-202ENST00000381208 RCOR3Q9P2K3 495 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-202ENST00000381208 MYO1AQ9UBC5 1043 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 IP6K2Q9UHH9 426 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 COQ6Q9Y2Z9 468 aa13.05□□□□□ -0.32
RPAIN-202ENST00000381208 NBEAQ8NFP9 2946 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 HTRA2O43464 458 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-202ENST00000381208 TRIM23P36406 574 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 RGRP47804 291 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 TLE3Q04726 772 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 CCDC173Q0VFZ6 552 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 PEX6Q13608 980 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 E4F1Q66K89 784 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-202ENST00000381208 LIPIQ6XZB0 460 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 POLNQ7Z5Q5 900 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 SPACA3Q8IXA5 215 aa13.04□□□□□ -0.32
RPAIN-202ENST00000381208 NDUFAF2Q8N183 169 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms