RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 RPL7AP62424 266 aaKnown RBP23.24■■□□□ 1.31
U2AF1-202ENST00000380276 CT47A1Q5JQC4 288 aaPredicted RBP23.24■■□□□ 1.31
U2AF1-202ENST00000380276 KCTD16Q68DU8 428 aa23.24■■□□□ 1.31
U2AF1-202ENST00000380276 MON1BQ7L1V2 547 aa23.24■■□□□ 1.31
U2AF1-202ENST00000380276 ZSWIM9Q86XI8 627 aa23.24■■□□□ 1.31
U2AF1-202ENST00000380276 OR56A4Q8NGH8 313 aa23.24■■□□□ 1.31
U2AF1-202ENST00000380276 ENOX1Q8TC92 643 aaKnown RBP23.24■■□□□ 1.31
U2AF1-202ENST00000380276 OR1E3Q8WZA6 343 aa23.24■■□□□ 1.31
U2AF1-202ENST00000380276 COL26A1Q96A83 441 aa23.24■■□□□ 1.31
U2AF1-202ENST00000380276 RBM15Q96T37 977 aaKnown RBP eCLIP23.24■■□□□ 1.31
U2AF1-202ENST00000380276 CNPY3Q9BT09 278 aa23.24■■□□□ 1.31
U2AF1-202ENST00000380276 CINPQ9BW66 212 aaPredicted RBP23.24■■□□□ 1.31
U2AF1-202ENST00000380276 PDFQ9HBH1 243 aa23.24■■□□□ 1.31
U2AF1-202ENST00000380276 MRPL40Q9NQ50 206 aaKnown RBP23.24■■□□□ 1.31
U2AF1-202ENST00000380276 CHMP5Q9NZZ3 219 aa23.24■■□□□ 1.31
U2AF1-202ENST00000380276 ARHGAP42A6NI28 874 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 DAPK3O43293 454 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 PALMO75781 387 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 ELFN1P0C7U0 828 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 ITIH1P19827 911 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 RGRP47804 291 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 MAPK10P53779 464 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 AIF1P55008 147 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 NFATC3Q12968 1075 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 SRSF6Q13247 344 aaKnown RBP23.23■■□□□ 1.31
U2AF1-202ENST00000380276 ARHGEF7Q14155 803 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 PHF19Q5T6S3 580 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 SRLQ86TD4 932 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 GPR156Q8NFN8 814 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 TUBGCP5Q96RT8 1024 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 AGPAT1Q99943 283 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 FAM117AQ9C073 453 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 DPEP2Q9H4A9 486 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 DHX35Q9H5Z1 703 aaKnown RBP23.23■■□□□ 1.31
U2AF1-202ENST00000380276 LRRC19Q9H756 370 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 SP110Q9HB58 689 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 DONSONQ9NYP3 566 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 SIK3Q9Y2K2 1263 aa23.23■■□□□ 1.31
U2AF1-202ENST00000380276 TMEM202A6NGA9 273 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 A8MX80 341 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 EEF2KO00418 725 aaKnown RBP23.22■■□□□ 1.31
U2AF1-202ENST00000380276 PRAMEF11O60813 436 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 RECQL5O94762 991 aaPredicted RBP23.22■■□□□ 1.31
U2AF1-202ENST00000380276 KELP23276 732 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 CCKBRP32239 447 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 PAPOLAP51003 745 aaKnown RBP23.22■■□□□ 1.31
U2AF1-202ENST00000380276 NDST2P52849 883 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 BCL2L1Q07817 233 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 CDKAL1Q5VV42 579 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 TSEN2Q8NCE0 465 aaKnown RBP23.22■■□□□ 1.31
U2AF1-202ENST00000380276 ANKRD20A12PQ8NF67 263 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 FUBP1Q96AE4 644 aaKnown RBP23.22■■□□□ 1.31
U2AF1-202ENST00000380276 SLC39A8Q9C0K1 460 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 CLMPQ9H6B4 373 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 CYP4F12Q9HCS2 524 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 FGF22Q9HCT0 170 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 SEPT10Q9P0V9 454 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 LRIT1Q9P2V4 623 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 AP4E1Q9UPM8 1137 aa23.22■■□□□ 1.31
U2AF1-202ENST00000380276 SETXQ7Z333 2677 aaKnown RBP23.22■■□□□ 1.31
U2AF1-202ENST00000380276 DFFAO00273 331 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 TEX33O43247 280 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 EFSO43281 561 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 LIPCP11150 499 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 GLB1P16278 677 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 COPB1P53618 953 aaKnown RBP23.21■■□□□ 1.31
U2AF1-202ENST00000380276 KIAA1024LP59773 190 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 AGERQ15109 404 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 MAP9Q49MG5 647 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 C14orf28Q4W4Y0 310 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 MANEAQ5SRI9 462 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 SFTPA2Q8IWL1 248 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 SGF29Q96ES7 293 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 TMEM168Q9H0V1 697 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 FANCLQ9NW38 375 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 DGKBQ9Y6T7 804 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 RNF215Q9Y6U7 377 aa23.21■■□□□ 1.31
U2AF1-202ENST00000380276 PRAMEF33A0A0G2JMD5 474 aa23.2■■□□□ 1.3
U2AF1-202ENST00000380276 PRAMEF10O60809 474 aa23.2■■□□□ 1.3
U2AF1-202ENST00000380276 KCNC4Q03721 635 aa23.2■■□□□ 1.3
U2AF1-202ENST00000380276 RALGDSQ12967 914 aa23.2■■□□□ 1.3
U2AF1-202ENST00000380276 ACOX1Q15067 660 aa23.2■■□□□ 1.3
U2AF1-202ENST00000380276 EXTL1Q92935 676 aa23.2■■□□□ 1.3
U2AF1-202ENST00000380276 CMKLR1Q99788 373 aa23.2■■□□□ 1.3
U2AF1-202ENST00000380276 WDR26Q9H7D7 661 aa23.2■■□□□ 1.3
U2AF1-202ENST00000380276 APPL1Q9UKG1 709 aa23.2■■□□□ 1.3
U2AF1-202ENST00000380276 PCDHB11Q9Y5F2 797 aa23.2■■□□□ 1.3
U2AF1-202ENST00000380276 TCRBV5S1A1TA0A578 114 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 NOBOXO60393 691 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 PSMA2P25787 234 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 HTR7P34969 479 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 OGDHQ02218 1023 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 UBXN1Q04323 297 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 BIRC2Q13490 618 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 CERCAMQ5T4B2 595 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 SPECC1LQ69YQ0 1117 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 LIPIQ6XZB0 460 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 SPRED1Q7Z699 444 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 VASH2Q86V25 355 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 EXD3Q8N9H8 876 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms