RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 VCANP13611 3396 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 OR6C75A6NL08 312 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 CKMP06732 381 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 FGFR3P22607 806 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 SLC1A2P43004 574 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 RENBPP51606 427 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 INHBCP55103 352 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 SLC44A2Q8IWA5 706 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-201ENST00000379433 JPH3Q8WXH2 748 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-201ENST00000379433 FAM96AQ9H5X1 160 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 ATP13A1Q9HD20 1204 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 PNPLA8Q9NP80 782 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 PRKAG3Q9UGI9 489 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 PRKAB1Q9Y478 270 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 REV3LO60673 3130 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 VWA8A3KMH1 1905 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 E9PBE3 544 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 M0QX08 132 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 TMEM127O75204 238 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 SEC24DO94855 1032 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-201ENST00000379433 KLKB1P03952 638 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 CHRNGP07510 517 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 BPGMP07738 259 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 SLC2A3P11169 496 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 CPA3P15088 417 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 WEE1P30291 646 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 GKP32189 559 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 SLC1A6P48664 564 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 PPM1FP49593 454 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-201ENST00000379433 CCT8P50990 548 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 ARSDP51689 593 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 NAGLUP54802 743 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 SMAD3P84022 425 aaKnown RBP10.87□□□□□ -0.67
NEDD9-201ENST00000379433 STXBP5Q5T5C0 1151 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 ATG16L1Q676U5 607 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 KCTD11Q693B1 232 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 OR13C4Q8NGS5 318 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 MYLIPQ8WY64 445 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 GRAMD1AQ96CP6 724 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 SLC39A13Q96H72 371 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 IGSF21Q96ID5 467 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 TBATAQ96M53 351 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 RBBP8Q99708 897 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 CPNE1Q99829 537 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 ABCG8Q9H221 673 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 SARS2Q9NP81 518 aaKnown RBP10.87□□□□□ -0.67
NEDD9-201ENST00000379433 TLR9Q9NR96 1032 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 GALNT8Q9NY28 637 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 EMCNQ9ULC0 261 aa10.87□□□□□ -0.67
NEDD9-201ENST00000379433 H0Y626 953 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 DCTN3O75935 186 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 BAIAP3O94812 1187 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 AGR2O95994 175 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 FESP07332 822 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 RALBP11234 206 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 ALADP13716 330 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 NQO1P15559 274 aaKnown RBP10.86□□□□□ -0.67
NEDD9-201ENST00000379433 GABRB3P28472 473 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 SLC8A1P32418 973 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 GEMP55040 296 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 ELF3P78545 371 aaPredicted RBP10.86□□□□□ -0.67
NEDD9-201ENST00000379433 HECTD3Q5T447 861 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 TRIM68Q6AZZ1 485 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 PKN3Q6P5Z2 889 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 SHQ1Q6PI26 577 aaKnown RBP10.86□□□□□ -0.67
NEDD9-201ENST00000379433 CLNKQ7Z7G1 428 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 PIM3Q86V86 326 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 LONP2Q86WA8 852 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 CEP97Q8IW35 865 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 PGBD5Q8N414 524 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 SNX31Q8N9S9 440 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 HIPK4Q8NE63 616 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 NXNL1Q96CM4 212 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 MTBPQ96DY7 904 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 TRPM5Q9NZQ8 1165 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 DNMT3LQ9UJW3 386 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 ZNF180Q9UJW8 692 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 SLC12A4Q9UP95 1085 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 A0A1B0GVG6 124 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 H7C4K7 107 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 FCHO1O14526 889 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 PLIN3O60664 434 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 USP1O94782 785 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 ESRRAP11474 423 aaPredicted RBP10.86□□□□□ -0.67
NEDD9-201ENST00000379433 EZRP15311 586 aaKnown RBP10.86□□□□□ -0.67
NEDD9-201ENST00000379433 CRHR1P34998 444 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 RGRP47804 291 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 ANO4Q32M45 955 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 ATG14Q6ZNE5 492 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 MARK2Q7KZI7 788 aaKnown RBP10.86□□□□□ -0.67
NEDD9-201ENST00000379433 TMC7Q7Z402 723 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 TMEM135Q86UB9 458 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 DTNBP1Q96EV8 351 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 VAT1Q99536 393 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 NAT9Q9BTE0 207 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 MYOFQ9NZM1 2061 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 FAM95CA0A1B0GW59 222 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 SUPT3HO75486 399 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 ARSAP15289 507 aa10.86□□□□□ -0.67
NEDD9-201ENST00000379433 ARL1P40616 181 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms