RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 CACNA2D1P54289 1103 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 USP4Q13107 963 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 OLIG2Q13516 323 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 KCNJ11Q14654 390 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 CRY1Q16526 586 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 SNX32Q86XE0 403 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 TBC1D19Q8N5T2 526 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 VPS37AQ8NEZ2 397 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 B4GALNT2Q8NHY0 566 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 TRPC4APQ8TEL6 797 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 PTCD2Q8WV60 388 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 MYO19Q96H55 970 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 IGSF21Q96ID5 467 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 FAM126AQ9BYI3 521 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 ZFYVE1Q9HBF4 777 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 DOLKQ9UPQ8 538 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 FCF1Q9Y324 198 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 PDZK1P1A8MUH7 402 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 H3BMM5 538 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 INSIG1O15503 277 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 HLA-DQB2P05538 268 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 PTPN2P17706 415 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 DGKAP23743 735 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 SKIV2L2P42285 1042 aaKnown RBP14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 MED21Q13503 144 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 CAMK2GQ13555 558 aaPredicted RBP14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 MILR1Q7Z6M3 343 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 KYQ8NBH2 561 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 SERAC1Q96JX3 654 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 COPS8Q99627 209 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 RBBP8Q99708 897 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 ACSS2Q9NR19 701 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 SLC17A6Q9P2U8 582 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 LAMB1P07942 1786 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 HDAC3O15379 428 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 CNTN5O94779 1100 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 SLC2A4P14672 509 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 ACVRL1P37023 503 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 MAGEA11P43364 429 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 ESRRGP62508 458 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 SGCGQ13326 291 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 PTK2BQ14289 1009 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 DLG2Q15700 870 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 ZBTB6Q15916 424 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 DOK6Q6PKX4 331 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 MRPL10Q7Z7H8 261 aaKnown RBP14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 LRRTM3Q86VH5 581 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 CYP2S1Q96SQ9 504 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 NMUR1Q9HB89 426 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 DEC1Q9P2X7 70 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 ATP6AP2A0A1C7CYW4 349 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 TTC24A2A3L6 582 aaPredicted RBP14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 EVPLLA8MZ36 301 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 ZBTB14O43829 449 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 ATP6AP2O75787 350 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 RPP40O75818 363 aaKnown RBP14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 PHEXP78562 749 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 FPGSQ05932 587 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 TSTD2Q5T7W7 516 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 IZUMO2Q6UXV1 221 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 CHPFQ8IZ52 775 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 ZDHHC14Q8IZN3 488 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 FNDC5Q8NAU1 212 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 C3orf58Q8NDZ4 430 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 PRPF18Q99633 342 aaKnown RBP14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 SIKE1Q9BRV8 207 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 BTBD10Q9BSF8 475 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 ING2Q9H160 280 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 SAR1AQ9NR31 198 aa14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 ARIH1Q9Y4X5 557 aaPredicted RBP14.24□□□□□ -0.13
SHROOM1-203ENST00000378679 MEI4A8MW99 385 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 PRMT5O14744 637 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 SEC24DO94855 1032 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 CYP2A7P20853 494 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 NCALDP61601 193 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 MOGSQ13724 837 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 LIPMQ5VYY2 423 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 RNF43Q68DV7 783 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 SMYD5Q6GMV2 418 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 C14orf80Q86SX3 495 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 NXNL1Q96CM4 212 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 MED8Q96G25 268 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 ABCG8Q9H221 673 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 TMLHEQ9NVH6 421 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 OPTCQ9UBM4 332 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 STK39Q9UEW8 545 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 CEP290O15078 2479 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 CXorf49A8MYA2 514 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 PROCP04070 461 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 EPHA3P29320 983 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 GPX6P59796 221 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 GALNT2Q10471 571 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 NFYCQ13952 458 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 SIX1Q15475 284 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 TMC5Q6UXY8 1006 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 MARK2Q7KZI7 788 aaKnown RBP14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 ZNF398Q8TD17 642 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 CSGALNACT1Q8TDX6 532 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 SPATA17Q96L03 361 aa14.23□□□□□ -0.13
SHROOM1-203ENST00000378679 USP29Q9HBJ7 922 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms