RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 RREB1Q92766 1687 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 CLDN25C9JDP6 229 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 B4GALT5O43286 388 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 RECQL4O94761 1208 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 ZNF7P17097 686 aaPredicted RBP8.8□□□□□ -1
PCDH9-202ENST00000377865 MSX2P35548 267 aaPredicted RBP8.8□□□□□ -1
PCDH9-202ENST00000377865 SOAT1P35610 550 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 ABL2P42684 1182 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 IL12RB1P42701 662 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 HECTD2Q5U5R9 776 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 FRMD7Q6ZUT3 714 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 ANKS3Q6ZW76 656 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 RAB42Q8N4Z0 105 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 C12orf29Q8N999 325 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 C1orf127Q8N9H9 656 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 CAPSLQ8WWF8 208 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 FBXO32Q969P5 355 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 PLEKHA8Q96JA3 519 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 FANCEQ9HB96 536 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 ABI2Q9NYB9 513 aaPredicted RBP8.8□□□□□ -1
PCDH9-202ENST00000377865 TMEM9Q9P0T7 183 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 EGFL7Q9UHF1 273 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 TCAF1Q9Y4C2 921 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 AKAP11Q9UKA4 1901 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 CPSF4O95639 269 aaKnown RBP8.8□□□□□ -1
PCDH9-202ENST00000377865 CHI3L1P36222 383 aaPredicted RBP8.8□□□□□ -1
PCDH9-202ENST00000377865 RAB14P61106 215 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 OGDHQ02218 1023 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 MERTKQ12866 999 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 MFSD14CQ5VZR4 134 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 DCLRE1AQ6PJP8 1040 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 DEPDC4Q8N2C3 294 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 ELMOD1Q8N336 334 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 ZNF420Q8TAQ5 688 aaPredicted RBP8.8□□□□□ -1
PCDH9-202ENST00000377865 HPS1Q92902 700 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 DNAJC1Q96KC8 554 aaKnown RBP8.8□□□□□ -1
PCDH9-202ENST00000377865 OSMRQ99650 979 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 STRA6Q9BX79 667 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 H2AFY2Q9P0M6 372 aaPredicted RBP8.8□□□□□ -1
PCDH9-202ENST00000377865 IFT80Q9P2H3 777 aaPredicted RBP8.8□□□□□ -1
PCDH9-202ENST00000377865 RAPGEFL1Q9UHV5 662 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 CRYL1Q9Y2S2 319 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 ASB3Q9Y575 518 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 SESN1Q9Y6P5 492 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 ZBTB11O95625 1053 aaPredicted RBP8.8□□□□□ -1
PCDH9-202ENST00000377865 SLURP2P0DP57 97 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 FGFR1P11362 822 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 CCNCP24863 283 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 PTPN3P26045 913 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 L1CAMP32004 1257 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 NNMTP40261 264 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 GJA8P48165 433 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 ANXA11P50995 505 aaKnown RBP8.8□□□□□ -1
PCDH9-202ENST00000377865 ZNF132P52740 706 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 SLC5A3P53794 718 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 TMEM132BQ14DG7 1078 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 PDZK1Q5T2W1 519 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 OGFRL1Q5TC84 451 aaPredicted RBP8.8□□□□□ -1
PCDH9-202ENST00000377865 GLB1LQ6UWU2 654 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 HIPK1Q86Z02 1210 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 MPP5Q8N3R9 675 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 POC5Q8NA72 575 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 ZNF540Q8NDQ6 660 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 TWIST2Q8WVJ9 160 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 SEPT5Q99719 369 aaPredicted RBP8.8□□□□□ -1
PCDH9-202ENST00000377865 ECM29Q5VYK3 1845 aa8.8□□□□□ -1
PCDH9-202ENST00000377865 RFPL1O75677 317 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 EPN2O95208 641 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 LINC00032P0C843 101 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 FGF3P11487 239 aaPredicted RBP8.79□□□□□ -1
PCDH9-202ENST00000377865 AKAP5P24588 427 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 CD86P42081 329 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 PPP3CCP48454 512 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 POLR2JP52435 117 aaKnown RBP8.79□□□□□ -1
PCDH9-202ENST00000377865 ITGA1P56199 1179 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 CXCL9Q07325 125 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 CNTN1Q12860 1018 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 CEP78Q5JTW2 689 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 C9orf57Q5W0N0 161 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 SPESP1Q6UW49 350 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 TREML1Q86YW5 311 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 TMEM174Q8WUU8 243 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 NUSAP1Q9BXS6 441 aaKnown RBP8.79□□□□□ -1
PCDH9-202ENST00000377865 TDRD1Q9BXT4 1180 aaKnown RBP8.79□□□□□ -1
PCDH9-202ENST00000377865 BCO2Q9BYV7 579 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 TMEM245Q9H330 911 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 TLR8Q9NR97 1041 aaKnown RBP8.79□□□□□ -1
PCDH9-202ENST00000377865 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.79□□□□□ -1
PCDH9-202ENST00000377865 NUDT5Q9UKK9 219 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 BTBD3Q9Y2F9 522 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 DOT1LQ8TEK3 1739 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 MYH1P12882 1939 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 H7C4K7 107 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 NADKO95544 446 aaPredicted RBP8.79□□□□□ -1
PCDH9-202ENST00000377865 METTL18O95568 372 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 EGFRP00533 1210 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 CYBBP04839 570 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 GRK3P35626 688 aa8.79□□□□□ -1
PCDH9-202ENST00000377865 MAGEA10P43363 369 aaPredicted RBP8.79□□□□□ -1
PCDH9-202ENST00000377865 ATP4BP51164 291 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms