RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 NPHS1O60500 1241 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 NCF1P14598 390 aaPredicted RBP16.31■□□□□ 0.2
TRIM27-202ENST00000377199 ACVRL1P37023 503 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.31■□□□□ 0.2
TRIM27-202ENST00000377199 SIRPB2Q5JXA9 342 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 KDELC1Q6UW63 502 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 FAM110BQ8TC76 370 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 LRCH3Q96II8 777 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 DNAJC1Q96KC8 554 aaKnown RBP16.31■□□□□ 0.2
TRIM27-202ENST00000377199 C3orf30Q96M34 536 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 PKMYT1Q99640 499 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 SEMA3CQ99985 751 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 EPS15L1Q9UBC2 864 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 LZTS1Q9Y250 596 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 PCDHGA7Q9Y5G6 932 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 MKI67P46013 3256 aaKnown RBP16.31■□□□□ 0.2
TRIM27-202ENST00000377199 FBP2O00757 339 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 TPST1O60507 370 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 TADA2AO75478 443 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 ASGR1P07306 291 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 PFKFB4Q16877 469 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 MS4A13Q5J8X5 152 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 SERINC5Q86VE9 423 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 NSUN5Q96P11 429 aaKnown RBP16.31■□□□□ 0.2
TRIM27-202ENST00000377199 SMIM14Q96QK8 99 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 PRKD2Q9BZL6 878 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 EML4Q9HC35 981 aaKnown RBP16.31■□□□□ 0.2
TRIM27-202ENST00000377199 CACNA2D2Q9NY47 1150 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 FAM50BQ9Y247 325 aa16.31■□□□□ 0.2
TRIM27-202ENST00000377199 A0A0U1RQF3 1178 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 PRORSD1PA6NEY8 169 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 NR5A2O00482 541 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 MRASO14807 208 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 CTGFP29279 349 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 MAPRE1Q15691 268 aaKnown RBP16.3■□□□□ 0.2
TRIM27-202ENST00000377199 DIS3LQ8TF46 1054 aaKnown RBP16.3■□□□□ 0.2
TRIM27-202ENST00000377199 LPGAT1Q92604 370 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 PTERQ96BW5 349 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 BTRCQ9Y297 605 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 UBXN8O00124 270 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 DUSP11O75319 330 aaKnown RBP16.3■□□□□ 0.2
TRIM27-202ENST00000377199 BCAS2O75934 225 aaPredicted RBP16.3■□□□□ 0.2
TRIM27-202ENST00000377199 CLPTM1O96005 669 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 HOXC8P31273 242 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 EIF4EBP2Q13542 120 aaPredicted RBP16.3■□□□□ 0.2
TRIM27-202ENST00000377199 LPIN1Q14693 890 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 C10orf120Q5SQS8 335 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 PGBD5Q8N414 524 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 AFAP1L2Q8N4X5 818 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 KLHDC9Q8NEP7 349 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 CALML6Q8TD86 181 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 MYEOVQ96EZ4 313 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 CYP2S1Q96SQ9 504 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 ZYG11BQ9C0D3 744 aa16.3■□□□□ 0.2
TRIM27-202ENST00000377199 TRIM38O00635 465 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 PEX11BO96011 259 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 OR1E1P30953 314 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 SLC7A2P52569 658 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 PFKPQ01813 784 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 MAP7D1Q3KQU3 841 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 FBXL22Q6P050 247 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 PTGR2Q8N8N7 351 aaPredicted RBP16.29■□□□□ 0.2
TRIM27-202ENST00000377199 DCBLD1Q8N8Z6 715 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 IMP4Q96G21 291 aaKnown RBP16.29■□□□□ 0.2
TRIM27-202ENST00000377199 CIB1Q99828 191 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 TRIM62Q9BVG3 475 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 Q9H521 79 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 SPC25Q9HBM1 224 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 BCAP29Q9UHQ4 241 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 NYNRINQ9P2P1 1898 aaKnown RBP16.29■□□□□ 0.2
TRIM27-202ENST00000377199 A0A0U1RQS6 177 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 ZNF839A8K0R7 811 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 M0QZQ0 153 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 ACOT8O14734 319 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 SPATA31D3P0C874 917 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 GFAPP14136 432 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 FOXA1P55317 472 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 ECT2LQ008S8 904 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 ZNF33AQ06730 810 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 POLD3Q15054 466 aaPredicted RBP16.29■□□□□ 0.2
TRIM27-202ENST00000377199 AP1ARQ63HQ0 302 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 SPATA31D4Q6ZUB0 917 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 SEPT5Q99719 369 aaPredicted RBP16.29■□□□□ 0.2
TRIM27-202ENST00000377199 MID1IP1Q9NPA3 183 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 EGFL7Q9UHF1 273 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 AURKCQ9UQB9 309 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 AP4S1Q9Y587 144 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 SLC12A8A0AV02 714 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 GOT2P00505 430 aaKnown RBP16.29■□□□□ 0.2
TRIM27-202ENST00000377199 CYP11A1P05108 521 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 MMP2P08253 660 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 RBP1P09455 135 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 CHRM3P20309 590 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 LEPRP48357 1165 aaKnown RBP16.29■□□□□ 0.2
TRIM27-202ENST00000377199 CLCN5P51795 746 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 XIAPP98170 497 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 STX5Q13190 355 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 CAPRIN1Q14444 709 aaKnown RBP16.29■□□□□ 0.2
TRIM27-202ENST00000377199 MTX3Q5HYI7 312 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 SCIMPQ6UWF3 145 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms