RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SULT1C4O75897 302 aa16.58■□□□□ 0.25
TRIM39-201ENST00000376656 BEST1O76090 585 aa16.58■□□□□ 0.25
TRIM39-201ENST00000376656 IPO13O94829 963 aaKnown RBP16.58■□□□□ 0.25
TRIM39-201ENST00000376656 RASAL1O95294 804 aa16.58■□□□□ 0.25
TRIM39-201ENST00000376656 GPX3P22352 226 aa16.58■□□□□ 0.25
TRIM39-201ENST00000376656 PSMA4P25789 261 aaKnown RBP16.58■□□□□ 0.25
TRIM39-201ENST00000376656 EGFLAMQ63HQ2 1017 aa16.58■□□□□ 0.25
TRIM39-201ENST00000376656 SLC15A3Q8IY34 581 aa16.58■□□□□ 0.25
TRIM39-201ENST00000376656 CRYBG2Q8N1P7 616 aa16.58■□□□□ 0.25
TRIM39-201ENST00000376656 ROPN1LQ96C74 230 aa16.58■□□□□ 0.25
TRIM39-201ENST00000376656 RHOBTB2Q9BYZ6 727 aa16.58■□□□□ 0.25
TRIM39-201ENST00000376656 TBC1D13Q9NVG8 400 aa16.58■□□□□ 0.25
TRIM39-201ENST00000376656 HACD3Q9P035 362 aa16.58■□□□□ 0.25
TRIM39-201ENST00000376656 GIMAP2Q9UG22 337 aa16.58■□□□□ 0.25
TRIM39-201ENST00000376656 CLDN5O00501 218 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 SNAP91O60641 907 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 APBA3O96018 575 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 MT-CYBP00156 380 aaPredicted RBP16.58■□□□□ 0.24
TRIM39-201ENST00000376656 CHRM3P20309 590 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 RABGGTBP53611 331 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 ATP6V0D1P61421 351 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 CD300CQ08708 224 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 FAM83EQ2M2I3 478 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 FBXO16Q8IX29 292 aaPredicted RBP16.58■□□□□ 0.24
TRIM39-201ENST00000376656 DHRSXQ8N5I4 330 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 HDAC11Q96DB2 347 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 CELF6Q96J87 481 aaKnown RBP16.58■□□□□ 0.24
TRIM39-201ENST00000376656 SLC45A3Q96JT2 553 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 A0A087X1B8 175 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 A0A0J9YYE9 177 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 CDH3P22223 829 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 CAPGP40121 348 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 SEMA3BQ13214 749 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 VPS26BQ4G0F5 336 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 CYBRD1Q53TN4 286 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 PCID2Q5JVF3 399 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 PNPLA1Q8N8W4 532 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 TERB1Q8NA31 727 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 PCYOX1LQ8NBM8 494 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 MTG1Q9BT17 334 aaPredicted RBP16.58■□□□□ 0.24
TRIM39-201ENST00000376656 SEZ6LQ9BYH1 1024 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 CMTM6Q9NX76 183 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 ABCD2Q9UBJ2 740 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 GNPTGQ9UJJ9 305 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 STAP1Q9ULZ2 295 aa16.58■□□□□ 0.24
TRIM39-201ENST00000376656 PLXNA1Q9UIW2 1896 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 B4GAT1O43505 415 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 MAP4P27816 1152 aaKnown RBP16.57■□□□□ 0.24
TRIM39-201ENST00000376656 SLC12A2P55011 1212 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 STX1BP61266 288 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 CYP2A13Q16696 494 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 KIF19Q2TAC6 998 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 IL31Q6EBC2 164 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 ZNF470Q6ECI4 717 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 GALNT18Q6P9A2 607 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 LBX2Q6XYB7 198 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 IFNLR1Q8IU57 520 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-201ENST00000376656 DDIASQ8IXT1 998 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 FEM1CQ96JP0 617 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 MYRFLQ96LU7 910 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 OLFM1Q99784 485 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 TRIM15Q9C019 465 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 ZFYVE28Q9HCC9 887 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 CD320Q9NPF0 282 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 SBF1O95248 1867 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 MYLKQ15746 1914 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 SPTLC1O15269 473 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 NCAM2O15394 837 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 BAIAP3O94812 1187 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 SNAP29O95721 258 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 MTHFD1P11586 935 aaKnown RBP16.57■□□□□ 0.24
TRIM39-201ENST00000376656 SOX11P35716 441 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 CD151P48509 253 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 MLLT10P55197 1068 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 NIPAL1Q6NVV3 410 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 MAGEE2Q8TD90 523 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-201ENST00000376656 DCPSQ96C86 337 aaKnown RBP16.57■□□□□ 0.24
TRIM39-201ENST00000376656 HNRNPABQ99729 332 aaKnown RBP16.57■□□□□ 0.24
TRIM39-201ENST00000376656 YIPF2Q9BWQ6 316 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 GSTO2Q9H4Y5 243 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 PTGDR2Q9Y5Y4 395 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 ZFC3H1O60293 1989 aaKnown RBP16.57■□□□□ 0.24
TRIM39-201ENST00000376656 ARPC2O15144 300 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 CPB1P15086 417 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 CCNA2P20248 432 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 CAPN3P20807 821 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 HMGB2P26583 209 aaKnown RBP16.57■□□□□ 0.24
TRIM39-201ENST00000376656 KCNC4Q03721 635 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 ITGADQ13349 1161 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 ZNF789Q5FWF6 425 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 TMTC4Q5T4D3 741 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 LCN8Q6JVE9 175 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 IPMKQ8NFU5 416 aa16.57■□□□□ 0.24
TRIM39-201ENST00000376656 SMPD3Q9NY59 655 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-201ENST00000376656 IFT80Q9P2H3 777 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-201ENST00000376656 FXYD1O00168 92 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 DYNC1LI2O43237 492 aaPredicted RBP16.56■□□□□ 0.24
TRIM39-201ENST00000376656 NOL3O60936 208 aaKnown RBP16.56■□□□□ 0.24
TRIM39-201ENST00000376656 MT-ND1P03886 318 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 KPNA2P52292 529 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms