RNA–Protein interactions for RNA: ENST00000375894.9

CTSL-204, Transcript of cathepsin L, human

TSL 3

Gene CTSL, Length 975 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSL-204	ENST00000375894	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.72	□□□□□ -0.21
CTSL-204	ENST00000375894	ANKMY1	Q9P2S6	941 aa		13.72	□□□□□ -0.21
CTSL-204	ENST00000375894	MOSPD1	Q9UJG1	213 aa		13.72	□□□□□ -0.21
CTSL-204	ENST00000375894	MFHAS1	Q9Y4C4	1052 aa		13.72	□□□□□ -0.21
CTSL-204	ENST00000375894	DAAM1	Q9Y4D1	1078 aa		13.72	□□□□□ -0.21
CTSL-204	ENST00000375894	FHOD1	Q9Y613	1164 aa		13.72	□□□□□ -0.21
CTSL-204	ENST00000375894	CELSR2	Q9HCU4	2923 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	TMEM202	A6NGA9	273 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	STMND1	H3BQB6	276 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	CACNB4	O00305	520 aa	Predicted RBP	13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	PES1	O00541	588 aa	Known RBP	13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	PRKCG	P05129	697 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	MME	P08473	750 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	MMP12	P39900	470 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	NOMO3	P69849	1222 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	MAN2A1	Q16706	1144 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	UGP2	Q16851	508 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	CCDC14	Q49A88	953 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	SPECC1L	Q69YQ0	1117 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	ARC	Q7LC44	396 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	DTX1	Q86Y01	620 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	PAF1	Q8N7H5	531 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	PLA2G15	Q8NCC3	412 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	OR56A4	Q8NGH8	313 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	GPT2	Q8TD30	523 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	TMEM168	Q9H0V1	697 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	NOL6	Q9H6R4	1146 aa	Known RBP	13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	LHX3	Q9UBR4	397 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	DGKB	Q9Y6T7	804 aa		13.71	□□□□□ -0.21
CTSL-204	ENST00000375894	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.71	□□□□□ -0.22
CTSL-204	ENST00000375894	CPNE6	O95741	557 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	CCL4	P13236	92 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	PRKCSH	P14314	528 aa	Predicted RBP	13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	PNLIP	P16233	465 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	KEL	P23276	732 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	EPHB2	P29323	1055 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	ATP1A2	P50993	1020 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	KIAA1024L	P59773	190 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	SKIDA1	Q1XH10	827 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	INO80D	Q53TQ3	878 aa	Predicted RBP	13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	BORA	Q6PGQ7	559 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	OGFOD3	Q6PK18	319 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	PIM3	Q86V86	326 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	DNAAF5	Q86Y56	855 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	LURAP1L	Q8IV03	231 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	RTL3	Q8N8U3	475 aa	Known RBP	13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	RCBTB1	Q8NDN9	531 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	JOSD2	Q8TAC2	188 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	FAM172A	Q8WUF8	416 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	FUBP1	Q96AE4	644 aa	Known RBP	13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	ADNP	Q9H2P0	1102 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	SUV39H2	Q9H5I1	410 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	CYP4F12	Q9HCS2	524 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	ATP8A1	Q9Y2Q0	1164 aa		13.7	□□□□□ -0.22
CTSL-204	ENST00000375894	TSPAN11	A1L157	253 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	RASA4B	C9J798	803 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	RASA4	O43374	803 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	NUDT21	O43809	227 aa	Known RBP	13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	NTRK1	P04629	796 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	ALDH4A1	P30038	563 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	MAZ	P56270	477 aa	Known RBP	13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	POLE2	P56282	527 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	OR1D5	P58170	312 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	KCNAB2	Q13303	367 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	BIRC2	Q13490	618 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	GRM3	Q14832	879 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	HSP90AA4P	Q58FG1	418 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	EFHC2	Q5JST6	749 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	STRADA	Q7RTN6	431 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	CAMK1D	Q8IU85	385 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	PYROXD2	Q8N2H3	581 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	IL22RA1	Q8N6P7	574 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	CCL4L1	Q8NHW4	92 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	KIAA1524	Q8TCG1	905 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	EPS8L1	Q8TE68	723 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	NUDT22	Q9BRQ3	303 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	C11orf70	Q9BRQ4	267 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	SLC12A9	Q9BXP2	914 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	EPN3	Q9H201	632 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	NDST4	Q9H3R1	872 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	UBA2	Q9UBT2	640 aa	Predicted RBP	13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	MED13	Q9UHV7	2174 aa		13.69	□□□□□ -0.22
CTSL-204	ENST00000375894	C2CD4B	A6NLJ0	364 aa		13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	RHPN2P1	A8MT19	583 aa		13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	TEX33	O43247	280 aa		13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	CREB3	O43889	395 aa		13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	GADD45B	O75293	160 aa	Predicted RBP	13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	RECQL5	O94762	991 aa	Predicted RBP	13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	ELFN1	P0C7U0	828 aa		13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	PTPN9	P43378	593 aa		13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	HDAC4	P56524	1084 aa		13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	B4GALNT1	Q00973	533 aa		13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	SERINC3	Q13530	473 aa		13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	UBAP2L	Q14157	1087 aa	Known RBP	13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	AGER	Q15109	404 aa		13.68	□□□□□ -0.22
CTSL-204	ENST00000375894	CYTH1	Q15438	398 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms