RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 COG4Q9H9E3 785 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 UBAP1Q9NZ09 502 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 PTTG2Q9NZH5 202 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 FBXO5Q9UKT4 447 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 CDY1Q9Y6F8 540 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 SUPT3HO75486 399 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 STMN1P16949 149 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 POLD2P49005 469 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 RAB10P61026 200 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 BTKQ06187 659 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 BFSP2Q13515 415 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 TLR1Q15399 786 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 NADSYN1Q6IA69 706 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 PRSS55Q6UWB4 352 aaPredicted RBP14.07□□□□□ -0.16
MSH5-202ENST00000375740 FSTL5Q8N475 847 aaPredicted RBP14.07□□□□□ -0.16
MSH5-202ENST00000375740 SPATA6LQ8N4H0 392 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 AGR3Q8TD06 166 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 NXNL1Q96CM4 212 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 HSPBAP1Q96EW2 488 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 ELMO2Q96JJ3 720 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 YIPF2Q9BWQ6 316 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 GRIP2Q9C0E4 1043 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 KLHL4Q9C0H6 718 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 GPAMQ9HCL2 828 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 MID2Q9UJV3 735 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 HEATR9A2RTY3 570 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 CAPN8A6NHC0 703 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 AURKAO14965 403 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 RAMP2O60895 175 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 COL6A2P12110 1019 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 OR1E1P30953 314 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 ACVRL1P37023 503 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 CD151P48509 253 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 TAS2R39P59534 338 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 FOLH1Q04609 750 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 CCNIQ14094 377 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 TRIP10Q15642 601 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 MYLK3Q32MK0 819 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 B3GNT6Q6ZMB0 384 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 FAM126BQ8IXS8 530 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 CEP70Q8NHQ1 597 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 RDH11Q8TC12 318 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 STYXQ8WUJ0 223 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 GAB3Q8WWW8 586 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 SEPT8Q92599 483 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 GPBP1L1Q9HC44 474 aaPredicted RBP14.06□□□□□ -0.16
MSH5-202ENST00000375740 VPS45Q9NRW7 570 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 TBKBP1A7MCY6 615 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 H7C4K7 107 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 H2AFYO75367 372 aaKnown RBP14.06□□□□□ -0.16
MSH5-202ENST00000375740 CCR10P46092 362 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 GRIA4P48058 902 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 KCNQ1P51787 676 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 SERINC3Q13530 473 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 ZNF789Q5FWF6 425 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 TSTD2Q5T7W7 516 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 LIPMQ5VYY2 423 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 LRRC8EQ6NSJ5 796 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 CNSTQ6PJW8 725 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 EPGNQ6UW88 154 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 REM2Q8IYK8 340 aaPredicted RBP14.06□□□□□ -0.16
MSH5-202ENST00000375740 TDRD5Q8NAT2 981 aaKnown RBP14.06□□□□□ -0.16
MSH5-202ENST00000375740 TET1Q8NFU7 2136 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 ARRDC2Q8TBH0 407 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 BCL7CQ8WUZ0 217 aaPredicted RBP14.06□□□□□ -0.16
MSH5-202ENST00000375740 GPR78Q96P69 363 aa14.06□□□□□ -0.16
MSH5-202ENST00000375740 UNKQ9C0B0 810 aaKnown RBP14.06□□□□□ -0.16
MSH5-202ENST00000375740 SLC38A8A6NNN8 435 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 TARM1B6A8C7 271 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 TLR5O60602 858 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 FKBP6O75344 327 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 CHRNGP07510 517 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 ZDHHC11BP0C7U3 371 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 NCF2P19878 526 aaPredicted RBP14.05□□□□□ -0.16
MSH5-202ENST00000375740 IL10RBQ08334 325 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 CBX3Q13185 183 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 TMC7Q7Z402 723 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 NPAS4Q8IUM7 802 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 SPNS2Q8IVW8 549 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 CFAP52Q8N1V2 620 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 PNPLA1Q8N8W4 532 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 MAPK15Q8TD08 544 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 RANBP9Q96S59 729 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 TTPALQ9BTX7 342 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 CFHR5Q9BXR6 569 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 ILKAPQ9H0C8 392 aaPredicted RBP14.05□□□□□ -0.16
MSH5-202ENST00000375740 MAN1C1Q9NR34 630 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 COMMD8Q9NX08 183 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 UXTQ9UBK9 157 aaPredicted RBP14.05□□□□□ -0.16
MSH5-202ENST00000375740 ADAM12O43184 909 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 GJB3O75712 270 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 ATF6P18850 670 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 TACR2P21452 398 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 NAGLUP54802 743 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 RING1Q06587 406 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 ELAVL2Q12926 359 aaKnown RBP14.05□□□□□ -0.16
MSH5-202ENST00000375740 PEX6Q13608 980 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 TMEM259Q4ZIN3 620 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 SLC9B1Q4ZJI4 515 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 SIRPB2Q5JXA9 342 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms