RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 LRRC38Q5VT99 294 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 RETSATQ6NUM9 610 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 RWDD4Q6NW29 188 aaKnown RBP12.3□□□□□ -0.44
LSM2-208ENST00000375661 GUSBP11Q6P575 273 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 RNF10Q8N5U6 811 aaKnown RBP12.3□□□□□ -0.44
LSM2-208ENST00000375661 PCDH20Q8N6Y1 951 aaKnown RBP12.3□□□□□ -0.44
LSM2-208ENST00000375661 CHST14Q8NCH0 376 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 DENND6BQ8NEG7 585 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 RAB7BQ96AH8 199 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 ATXN7L3BQ96GX2 97 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 IL12RB2Q99665 862 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 EPAS1Q99814 870 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 BOCQ9BWV1 1114 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 TSGA10Q9BZW7 698 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 PCDH18Q9HCL0 1135 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.3□□□□□ -0.44
LSM2-208ENST00000375661 NDFIP2Q9NV92 336 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 CWC15Q9P013 229 aaKnown RBP12.3□□□□□ -0.44
LSM2-208ENST00000375661 SPASTQ9UBP0 616 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 IPO11Q9UI26 975 aaKnown RBP12.3□□□□□ -0.44
LSM2-208ENST00000375661 PYCARDQ9ULZ3 195 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 GUCA1BQ9UMX6 200 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 FADS3Q9Y5Q0 445 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 CAPN6Q9Y6Q1 641 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 WASF2Q9Y6W5 498 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 SCN8AQ9UQD0 1980 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 CCDC187A0A096LP49 1063 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 A0A1W2PNU3 283 aaPredicted RBP12.29□□□□□ -0.44
LSM2-208ENST00000375661 WASH4PA8MWX3 477 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 TOR1BO14657 336 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 TSPAN6O43657 245 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 KRT86O43790 486 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 SPOPO43791 374 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 SLC28A2O43868 658 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 PALMO75781 387 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 ITGA2BP08514 1039 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 KRT7P08729 469 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 JUNDP17535 347 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 EPHB2P29323 1055 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 HCAR3P49019 387 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 SERPINH1P50454 418 aaKnown RBP12.29□□□□□ -0.44
LSM2-208ENST00000375661 PFN3P60673 137 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 SGCGQ13326 291 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 PDE1CQ14123 709 aaPredicted RBP12.29□□□□□ -0.44
LSM2-208ENST00000375661 PTK2BQ14289 1009 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 IFI16Q16666 785 aaKnown RBP12.29□□□□□ -0.44
LSM2-208ENST00000375661 PPP6R3Q5H9R7 873 aaPredicted RBP12.29□□□□□ -0.44
LSM2-208ENST00000375661 DPY19L3Q6ZPD9 716 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 RFX8Q6ZV50 586 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 POLNQ7Z5Q5 900 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 TFAP2DQ7Z6R9 452 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 DAAM2Q86T65 1068 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 REXO1L1PQ8IX06 675 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 RHOT1Q8IXI2 618 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 PLPP6Q8IY26 295 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 KIAA1524Q8TCG1 905 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 GRIN3AQ8TCU5 1115 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 RAPGEF5Q92565 580 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 LIN37Q96GY3 246 aaPredicted RBP12.29□□□□□ -0.44
LSM2-208ENST00000375661 KLF6Q99612 283 aaPredicted RBP12.29□□□□□ -0.44
LSM2-208ENST00000375661 HEPHQ9BQS7 1158 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 C1QTNF2Q9BXJ5 285 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 RETREG1Q9H6L5 497 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 LZTFL1Q9NQ48 299 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 TMEM248Q9NWD8 314 aa12.29□□□□□ -0.44
LSM2-208ENST00000375661 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.29□□□□□ -0.44
LSM2-208ENST00000375661 A0A0D9SEW6 157 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 ILVBLA1L0T0 632 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 C3orf70A6NLC5 250 aaPredicted RBP12.28□□□□□ -0.44
LSM2-208ENST00000375661 TMX2-CTNND1H3BSU7 103 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 RNF103O00237 685 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 EEF2KO00418 725 aaKnown RBP12.28□□□□□ -0.44
LSM2-208ENST00000375661 RAD51BO15315 384 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 ZNF821O75541 412 aaPredicted RBP12.28□□□□□ -0.44
LSM2-208ENST00000375661 TNNT1P13805 278 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 ERCC2P18074 760 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 AMPD1P23109 780 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 KDELR1P24390 212 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 OR1E1P30953 314 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 HTR7P34969 479 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 MARCKSL1P49006 195 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 CSRP3P50461 194 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 ZNF135P52742 658 aaPredicted RBP12.28□□□□□ -0.44
LSM2-208ENST00000375661 CDH6P55285 790 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 TPI1P60174 286 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 CLN3Q13286 438 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 EIF3IQ13347 325 aaKnown RBP12.28□□□□□ -0.44
LSM2-208ENST00000375661 DPYSQ14117 519 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 DPYSL3Q14195 570 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 DEFB133Q30KQ1 61 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 CARD16Q5EG05 197 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 C6orf132Q5T0Z8 1188 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 KIAA1614Q5VZ46 1190 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 NT5DC3Q86UY8 548 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 RTL3Q8N8U3 475 aaKnown RBP12.28□□□□□ -0.44
LSM2-208ENST00000375661 LMX1AQ8TE12 382 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 KRT35Q92764 455 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 CSPG4P5Q96PW8 444 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 CCNL2Q96S94 520 aaPredicted RBP12.28□□□□□ -0.44
LSM2-208ENST00000375661 TNKS2Q9H2K2 1166 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms