RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 TSPAN1O60635 241 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 ITGAVP06756 1048 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 COX4I1P13073 169 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 LMO2P25791 158 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 TRMT5Q32P41 509 aaKnown RBP17.21■□□□□ 0.35
MCF2L-203ENST00000375604 TRIQKQ629K1 86 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 GPRIN3Q6ZVF9 776 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 COQ6Q9Y2Z9 468 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 ABHD14A-ACY1A0A1B0GW23 586 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 C9JVG2 144 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 SLC28A2O43868 658 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 PIK3R1P27986 724 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 DSC2Q02487 901 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 AUHQ13825 339 aaKnown RBP17.21■□□□□ 0.35
MCF2L-203ENST00000375604 FAM187BQ17R55 369 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 KLHL12Q53G59 568 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 NKAPQ8N5F7 415 aaKnown RBP17.21■□□□□ 0.35
MCF2L-203ENST00000375604 HSFY1Q96LI6 401 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 POLR1BQ9H9Y6 1135 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 SGK2Q9HBY8 427 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 PCDH18Q9HCL0 1135 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 C2CD2Q9Y426 696 aa17.21■□□□□ 0.35
MCF2L-203ENST00000375604 A0A088AWK7 358 aa17.21■□□□□ 0.34
MCF2L-203ENST00000375604 NCANO14594 1321 aa17.21■□□□□ 0.34
MCF2L-203ENST00000375604 SGTAO43765 313 aa17.21■□□□□ 0.34
MCF2L-203ENST00000375604 KIF1CO43896 1103 aaKnown RBP17.21■□□□□ 0.34
MCF2L-203ENST00000375604 SCN2BO60939 215 aa17.21■□□□□ 0.34
MCF2L-203ENST00000375604 ZNF10P21506 573 aaPredicted RBP17.21■□□□□ 0.34
MCF2L-203ENST00000375604 NRLP54845 237 aa17.21■□□□□ 0.34
MCF2L-203ENST00000375604 MADCAM1Q13477 382 aa17.21■□□□□ 0.34
MCF2L-203ENST00000375604 LPIN1Q14693 890 aa17.21■□□□□ 0.34
MCF2L-203ENST00000375604 CBX2Q14781 532 aaPredicted RBP17.21■□□□□ 0.34
MCF2L-203ENST00000375604 GPN3Q9UHW5 284 aaPredicted RBP17.21■□□□□ 0.34
MCF2L-203ENST00000375604 SMIM31A0A1B0GVY4 71 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 ADH1CP00326 375 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 PRKCGP05129 697 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 NUP107P57740 925 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 GNA13Q14344 377 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 EIF3MQ7L2H7 374 aaKnown RBP17.2■□□□□ 0.34
MCF2L-203ENST00000375604 HDDC2Q7Z4H3 204 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 TMPRSS11BQ86T26 416 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 SLC28A3Q9HAS3 691 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 NMUR1Q9HB89 426 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 STK39Q9UEW8 545 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 RAB23Q9ULC3 237 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 TCRBV7S2A1N4TA0A589 114 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 RNF225M0QZC1 329 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-203ENST00000375604 ULK1O75385 1050 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 SELPP16109 830 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 NUP62P37198 522 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-203ENST00000375604 WNT3AP56704 352 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 ZNF460Q14592 562 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 PTPN20Q4JDL3 420 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 AKIRIN2Q53H80 203 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 NELL1Q92832 810 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 ART4Q93070 314 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 MRPL48Q96GC5 212 aaKnown RBP17.2■□□□□ 0.34
MCF2L-203ENST00000375604 MFSD14AQ96MC6 490 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 ANAPC2Q9UJX6 822 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 STARD13Q9Y3M8 1113 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 PCDHGC5Q9Y5F6 944 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 PNMA8CA0A1B0GUJ8 204 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 MAGEC1O60732 1142 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 CDK18Q07002 472 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 TATDN1Q6P1N9 297 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 FAM171BQ6P995 826 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 SPATA22Q8NHS9 363 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 ZNF671Q8TAW3 534 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 KIAA1522Q9P206 1035 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-203ENST00000375604 U3KQV3 271 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 HTR1BP28222 390 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 SF1Q15637 639 aaKnown RBP17.2■□□□□ 0.34
MCF2L-203ENST00000375604 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-203ENST00000375604 AMIGO2Q86SJ2 522 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 TOP6BLQ8N6T0 577 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 CLEC4CQ8WTT0 213 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 PTPN18Q99952 460 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 EFCAB10A6NFE3 127 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 FGBP02675 491 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 CREMQ03060 361 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 RGS1Q08116 209 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 KCTD21Q4G0X4 260 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 RNASE12Q5GAN4 147 aaKnown RBP17.2■□□□□ 0.34
MCF2L-203ENST00000375604 PPM1JQ5JR12 505 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 IRF2BP2Q7Z5L9 587 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 ARL14EPQ8N8R7 260 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-203ENST00000375604 OR4K2Q8NGD2 314 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 APBB2Q92870 758 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 SH3GL2Q99962 352 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 VPS4AQ9UN37 437 aa17.2■□□□□ 0.34
MCF2L-203ENST00000375604 SNRPB2P08579 225 aaKnown RBP17.19■□□□□ 0.34
MCF2L-203ENST00000375604 MAPKAPK3Q16644 382 aa17.19■□□□□ 0.34
MCF2L-203ENST00000375604 GK5Q6ZS86 529 aa17.19■□□□□ 0.34
MCF2L-203ENST00000375604 OFCC1Q8IZS5 231 aa17.19■□□□□ 0.34
MCF2L-203ENST00000375604 CLIC5Q9NZA1 410 aa17.19■□□□□ 0.34
MCF2L-203ENST00000375604 ZNF232Q9UNY5 417 aa17.19■□□□□ 0.34
MCF2L-203ENST00000375604 TNPO3Q9Y5L0 923 aaKnown RBP17.19■□□□□ 0.34
MCF2L-203ENST00000375604 BCL10O95999 233 aa17.19■□□□□ 0.34
MCF2L-203ENST00000375604 CDK7P50613 346 aa17.19■□□□□ 0.34
MCF2L-203ENST00000375604 SLC25A52Q3SY17 297 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms