RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 NOS2P35228 1153 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 NME5P56597 212 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 MRPS6P82932 125 aaKnown RBP11.15□□□□□ -0.62
CCDC40-203ENST00000374877 FRG1Q14331 258 aaKnown RBP11.15□□□□□ -0.62
CCDC40-203ENST00000374877 SNX17Q15036 470 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 TBCELQ5QJ74 424 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 NAPEPLDQ6IQ20 393 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 ELMSAN1Q6PJG2 1045 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 Q6ZNX1 250 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 HFE2Q6ZVN8 426 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 OTOP3Q7RTS5 596 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 MFSD6LQ8IWD5 586 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 AFAP1L2Q8N4X5 818 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 BEST2Q8NFU1 509 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 CYGBQ8WWM9 190 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 PHF21BQ96EK2 531 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 CELF6Q96J87 481 aaKnown RBP11.15□□□□□ -0.62
CCDC40-203ENST00000374877 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.15□□□□□ -0.62
CCDC40-203ENST00000374877 TNFRSF12AQ9NP84 129 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 DOLKQ9UPQ8 538 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 TRPV2Q9Y5S1 764 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 CLDN5O00501 218 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 DAB1O75553 588 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 COL6A2P12110 1019 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 TSPAN8P19075 237 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 ATP6V1B2P21281 511 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 PSMD8P48556 350 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 TAS2R39P59534 338 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 UGP2Q16851 508 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 KCTD21Q4G0X4 260 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 GPR107Q5VW38 600 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 PPP4R4Q6NUP7 873 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 DHRS4L2Q6PKH6 230 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 CATSPER4Q7RTX7 472 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 SIX6OS1Q8N1H7 587 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 OR2T34Q8NGX1 318 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 OR2T3Q8NH03 318 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 WNT8BQ93098 351 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 GPR78Q96P69 363 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 OSMRQ99650 979 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 SLC25A23Q9BV35 468 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 CXorf21Q9HAI6 301 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 CDHR5Q9HBB8 845 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 TBCCD1Q9NVR7 557 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 EGFL7Q9UHF1 273 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 SNX10Q9Y5X0 201 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 M0QZ92 97 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 ATE1O95260 518 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 ATP5F1P24539 256 aaPredicted RBP11.14□□□□□ -0.63
CCDC40-203ENST00000374877 YWHAQP27348 245 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 HMOX2P30519 316 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 ADRA1BP35368 520 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 MAGEA10P43363 369 aaPredicted RBP11.14□□□□□ -0.63
CCDC40-203ENST00000374877 RABGGTBP53611 331 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 IL31Q6EBC2 164 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 NOTUMQ6P988 496 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 CUZD1Q86UP6 607 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 LZTR1Q8N653 840 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 ZBTB8BQ8NAP8 495 aaPredicted RBP11.14□□□□□ -0.63
CCDC40-203ENST00000374877 RNF169Q8NCN4 708 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 SPATA22Q8NHS9 363 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 NPY6RQ99463 290 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 MRPL57Q9BQC6 102 aaKnown RBP11.14□□□□□ -0.63
CCDC40-203ENST00000374877 ADI1Q9BV57 179 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 CD300AQ9UGN4 299 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 NRP1O14786 923 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 KCNA5P22460 613 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 GRM5P41594 1212 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 ESRP1Q6NXG1 681 aaKnown RBP11.14□□□□□ -0.63
CCDC40-203ENST00000374877 ERMP1Q7Z2K6 904 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 KDELC2Q7Z4H8 507 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 ANKFN1Q8N957 763 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 SLC43A3Q8NBI5 491 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 IPMKQ8NFU5 416 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 FBRSL1Q9HCM7 1045 aaKnown RBP11.14□□□□□ -0.63
CCDC40-203ENST00000374877 PAIP2BQ9ULR5 123 aaKnown RBP11.14□□□□□ -0.63
CCDC40-203ENST00000374877 PCNTO95613 3336 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 SHROOM3Q8TF72 1996 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 A0A1W2PPW3 197 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 VARSP26640 1264 aaKnown RBP11.14□□□□□ -0.63
CCDC40-203ENST00000374877 CSRP3P50461 194 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 MAPK10P53779 464 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 KIF19Q2TAC6 998 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 FBXO47Q5MNV8 452 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 ZNF470Q6ECI4 717 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 CLEC6AQ6EIG7 209 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 SLC27A1Q6PCB7 646 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 XKR5Q6UX68 686 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 CAMK1DQ8IU85 385 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 SPPL2CQ8IUH8 684 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 OFCC1Q8IZS5 231 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 TNIP2Q8NFZ5 429 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 STON2Q8WXE9 905 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 GLT1D1Q96MS3 346 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 UHRF1Q96T88 793 aaPredicted RBP11.14□□□□□ -0.63
CCDC40-203ENST00000374877 HIPK3Q9H422 1215 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 TMEM181Q9P2C4 612 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 ZNHIT2Q9UHR6 403 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 TRHDEQ9UKU6 1024 aa11.14□□□□□ -0.63
CCDC40-203ENST00000374877 BLOC1S6Q9UL45 172 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms