RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 EDIL3O43854 480 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 ATP9AO75110 1047 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 NDST3O95803 873 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 CYP3A4P08684 503 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 CD63P08962 238 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 MATN1P21941 496 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 DUSP1P28562 367 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 ICAM3P32942 547 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 VPS41P49754 854 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 SETQ01105 290 aaPredicted RBP4.81□□□□□ -1.64
PMS1-202ENST00000374826 ITGB3BPQ13352 177 aaPredicted RBP4.81□□□□□ -1.64
PMS1-202ENST00000374826 ERV3-1Q14264 604 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 SLC5A9Q2M3M2 681 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 LETM2Q2VYF4 491 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 HSDL1Q3SXM5 330 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 CEP55Q53EZ4 464 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 CELF3Q5SZQ8 465 aaKnown RBP4.81□□□□□ -1.64
PMS1-202ENST00000374826 FAM90A2PQ658T7 463 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 RAP1GAP2Q684P5 730 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 GALNT17Q6IS24 598 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 XRRA1Q6P2D8 792 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 TLDC1Q6P9B6 456 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 PPTC7Q8NI37 304 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 GRAMD1AQ96CP6 724 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 TRMT61AQ96FX7 289 aaKnown RBP4.81□□□□□ -1.64
PMS1-202ENST00000374826 CDHR1Q96JP9 859 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 ZFYVE19Q96K21 471 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 GLT1D1Q96MS3 346 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 SPATA33Q96N06 139 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 HTATIP2Q9BUP3 242 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 EIF2AQ9BY44 585 aaKnown RBP4.81□□□□□ -1.64
PMS1-202ENST00000374826 MLXIPQ9HAP2 919 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 AGO4Q9HCK5 861 aaKnown RBP4.81□□□□□ -1.64
PMS1-202ENST00000374826 MLXIPLQ9NP71 852 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 STARD7Q9NQZ5 370 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 POT1Q9NUX5 634 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 MAN2B2Q9Y2E5 1009 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 Q9Y3F1 56 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 MYH10P35580 1976 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 GRIN2DO15399 1336 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 NFASCO94856 1347 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 A0A0U1RQG5 324 aaPredicted RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 VPS37CA5D8V6 355 aaPredicted RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 OR2W5A6NFC9 320 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 C2CD4BA6NLJ0 364 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 TTC34A8MYJ7 566 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 H3BQV1 296 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 IPO5O00410 1097 aaKnown RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 MSH4O15457 936 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 CHMP2AO43633 222 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 CCNT1O60563 726 aaKnown RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 CRYABP02511 175 aaKnown RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 LGALS2P05162 132 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 HSP90AA1P07900 732 aaKnown RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 TGFB3P10600 412 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 PECAM1P16284 738 aaPredicted RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 EGR1P18146 543 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 MMP8P22894 467 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 MARK3P27448 753 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 GABRB3P28472 473 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 CIITAP33076 1130 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 TCF7P36402 384 aaPredicted RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 CPA2P48052 419 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 SEMA3BQ13214 749 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 CUL4AQ13619 759 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 ITGA7Q13683 1181 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 ATP1A4Q13733 1029 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 NEDD9Q14511 834 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 SEMA3AQ14563 771 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 METTL7BQ6UX53 244 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 SLC39A5Q6ZMH5 540 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 ZNF793Q6ZN11 406 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 NIPA1Q7RTP0 329 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 TXLNBQ8N3L3 684 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 ARFGAP1Q8N6T3 406 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 PIGKQ92643 395 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 AKAP1Q92667 903 aaKnown RBP eCLIP4.8□□□□□ -1.64
PMS1-202ENST00000374826 SNX21Q969T3 373 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 P2RY11Q96G91 374 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 SDF4Q9BRK5 362 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 ZNF577Q9BSK1 485 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 MTG1Q9BT17 334 aaPredicted RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 TRMOQ9BU70 441 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 SCNM1Q9BWG6 230 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 TMEM8AQ9HCN3 771 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 RXFP3Q9NSD7 469 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 ASNSD1Q9NWL6 643 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 SLC9A2Q9UBY0 812 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 DDX25Q9UHL0 483 aaKnown RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 KIF3AQ9Y496 699 aa4.8□□□□□ -1.64
PMS1-202ENST00000374826 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 SIRT4Q9Y6E7 314 aaPredicted RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 RANBP2P49792 3224 aaKnown RBP4.8□□□□□ -1.64
PMS1-202ENST00000374826 ELP1O95163 1332 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 EMSYQ7Z589 1322 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 GSTTP1A0A1W2PQM5 241 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 SLC22A23A1A5C7 686 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 FAM90A8PA6NJQ4 464 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 H0YGN5 161 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms