RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 RAD51Q06609 339 aa17.65■□□□□ 0.42
C9orf43-202ENST00000374165 CAMK2GQ13555 558 aaPredicted RBP17.65■□□□□ 0.42
C9orf43-202ENST00000374165 GAS6Q14393 721 aa17.65■□□□□ 0.42
C9orf43-202ENST00000374165 UBXN2BQ14CS0 331 aa17.65■□□□□ 0.42
C9orf43-202ENST00000374165 ARMC12Q5T9G4 340 aa17.65■□□□□ 0.42
C9orf43-202ENST00000374165 KDM7AQ6ZMT4 941 aa17.65■□□□□ 0.42
C9orf43-202ENST00000374165 CROCCP2Q86T23 111 aa17.65■□□□□ 0.42
C9orf43-202ENST00000374165 UBALD2Q8IYN6 164 aa17.65■□□□□ 0.42
C9orf43-202ENST00000374165 KCNV2Q8TDN2 545 aa17.65■□□□□ 0.42
C9orf43-202ENST00000374165 TLCD1Q96CP7 247 aa17.65■□□□□ 0.42
C9orf43-202ENST00000374165 SLC6A17Q9H1V8 727 aa17.65■□□□□ 0.42
C9orf43-202ENST00000374165 SUN2Q9UH99 717 aa17.65■□□□□ 0.42
C9orf43-202ENST00000374165 CHMP2BQ9UQN3 213 aa17.65■□□□□ 0.42
C9orf43-202ENST00000374165 ARIH1Q9Y4X5 557 aaPredicted RBP17.65■□□□□ 0.42
C9orf43-202ENST00000374165 SPO11Q9Y5K1 396 aa17.65■□□□□ 0.42
C9orf43-202ENST00000374165 KANSL1LA0AUZ9 987 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 PLK4O00444 970 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 SOCS5O75159 536 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 ABHD2P08910 425 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 MRPS21P82921 87 aaKnown RBP17.64■□□□□ 0.41
C9orf43-202ENST00000374165 QPCTQ16769 361 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 FBXO43Q4G163 708 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 TMEM92Q6UXU6 159 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 MICALCLQ6ZW33 695 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 FBXO36Q8NEA4 188 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 ZNF641Q96N77 438 aaPredicted RBP17.64■□□□□ 0.41
C9orf43-202ENST00000374165 TTC25Q96NG3 672 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 LMAN1LQ9HAT1 526 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 LTB4R2Q9NPC1 389 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 CHRAC1Q9NRG0 131 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.64■□□□□ 0.41
C9orf43-202ENST00000374165 VPS13AQ96RL7 3174 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 DOCK9Q9BZ29 2069 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 SDR42E2A6NKP2 422 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 FAM170BA6NMN3 283 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 A8MX80 341 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 KPNA3O00505 521 aaPredicted RBP17.64■□□□□ 0.41
C9orf43-202ENST00000374165 NPC1O15118 1278 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 RGS16O15492 202 aaPredicted RBP17.64■□□□□ 0.41
C9orf43-202ENST00000374165 IL1BP01584 269 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 HOXB2P14652 356 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 HLA-DPA1P20036 260 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 COPAP53621 1224 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 CES3Q6UWW8 571 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 PIP4K2CQ8TBX8 421 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 OR8D1Q8WZ84 308 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 MAD1L1Q9Y6D9 718 aa17.64■□□□□ 0.41
C9orf43-202ENST00000374165 ABL2P42684 1182 aa17.63■□□□□ 0.41
C9orf43-202ENST00000374165 CBLBQ13191 982 aa17.63■□□□□ 0.41
C9orf43-202ENST00000374165 CASC4Q6P4E1 433 aa17.63■□□□□ 0.41
C9orf43-202ENST00000374165 CAPN12Q6ZSI9 719 aa17.63■□□□□ 0.41
C9orf43-202ENST00000374165 MDGA1Q8NFP4 955 aa17.63■□□□□ 0.41
C9orf43-202ENST00000374165 BLOC1S5Q8TDH9 187 aa17.63■□□□□ 0.41
C9orf43-202ENST00000374165 ADGRE3Q9BY15 652 aa17.63■□□□□ 0.41
C9orf43-202ENST00000374165 FRMD8Q9BZ67 464 aaPredicted RBP17.63■□□□□ 0.41
C9orf43-202ENST00000374165 BFARQ9NZS9 450 aa17.63■□□□□ 0.41
C9orf43-202ENST00000374165 KCTD3Q9Y597 815 aa17.63■□□□□ 0.41
C9orf43-202ENST00000374165 ZDBF2Q9HCK1 2354 aa17.63■□□□□ 0.41
C9orf43-202ENST00000374165 EIF3HO15372 352 aaKnown RBP eCLIP17.62■□□□□ 0.41
C9orf43-202ENST00000374165 BUD23O43709 281 aaKnown RBP17.62■□□□□ 0.41
C9orf43-202ENST00000374165 SYNCRIPO60506 623 aaKnown RBP17.62■□□□□ 0.41
C9orf43-202ENST00000374165 TCEA3O75764 348 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 FGF1P05230 155 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 SSTR1P30872 391 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 EPHB1P54762 984 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 SATB1Q01826 763 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 PTPRCAPQ14761 206 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 GRM3Q14832 879 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 ZNF805Q5CZA5 627 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 TNFAIP8L3Q5GJ75 292 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.62■□□□□ 0.41
C9orf43-202ENST00000374165 PAF1Q8N7H5 531 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 FLCNQ8NFG4 579 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 PYROXD1Q8WU10 500 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 EID2BQ96D98 161 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 LRIG1Q96JA1 1093 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 RSPH9Q9H1X1 276 aaPredicted RBP17.62■□□□□ 0.41
C9orf43-202ENST00000374165 TBC1D17Q9HA65 648 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 CTNNAL1Q9UBT7 734 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 ARL5AQ9Y689 179 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 A0A087WUV0 522 aaPredicted RBP17.62■□□□□ 0.41
C9orf43-202ENST00000374165 A0A0J9YYE9 177 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 TRBC1P01850 177 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 NPY2RP49146 381 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 GPX6P59796 221 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 STAT4Q14765 748 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 UGP2Q16851 508 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 SDE2Q6IQ49 451 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 TMIEQ8NEW7 156 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 ARRDC3Q96B67 414 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 MFSD3Q96ES6 412 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 SHDQ96IW2 340 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 EBNA1BP2Q99848 306 aaKnown RBP17.62■□□□□ 0.41
C9orf43-202ENST00000374165 IL22Q9GZX6 179 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 VPS37BQ9H9H4 285 aa17.62■□□□□ 0.41
C9orf43-202ENST00000374165 NPIPB15A6NHN6 443 aaPredicted RBP17.61■□□□□ 0.41
C9orf43-202ENST00000374165 C16orf96A6NNT2 1141 aa17.61■□□□□ 0.41
C9orf43-202ENST00000374165 LDB2O43679 373 aa17.61■□□□□ 0.41
C9orf43-202ENST00000374165 SHOX2O60902 331 aaPredicted RBP17.61■□□□□ 0.41
C9orf43-202ENST00000374165 PIAS1O75925 651 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms