RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 LIN52Q52LA3 116 aa13.36□□□□□ -0.27
A1CF-204ENST00000373997 PPM1JQ5JR12 505 aa13.36□□□□□ -0.27
A1CF-204ENST00000373997 CFAP157Q5JU67 520 aa13.36□□□□□ -0.27
A1CF-204ENST00000373997 DEFB107AQ8IZN7 70 aa13.36□□□□□ -0.27
A1CF-204ENST00000373997 DCLK2Q8N568 766 aa13.36□□□□□ -0.27
A1CF-204ENST00000373997 OR52K1Q8NGK4 314 aa13.36□□□□□ -0.27
A1CF-204ENST00000373997 SPPL3Q8TCT6 385 aa13.36□□□□□ -0.27
A1CF-204ENST00000373997 GDPD5Q8WTR4 605 aa13.36□□□□□ -0.27
A1CF-204ENST00000373997 SLC22A17Q8WUG5 538 aa13.36□□□□□ -0.27
A1CF-204ENST00000373997 STON2Q8WXE9 905 aa13.36□□□□□ -0.27
A1CF-204ENST00000373997 NCSTNQ92542 709 aa13.36□□□□□ -0.27
A1CF-204ENST00000373997 PRICKLE1Q96MT3 831 aaPredicted RBP13.36□□□□□ -0.27
A1CF-204ENST00000373997 LZTS1Q9Y250 596 aa13.36□□□□□ -0.27
A1CF-204ENST00000373997 ZFP37Q9Y6Q3 630 aaPredicted RBP13.36□□□□□ -0.27
A1CF-204ENST00000373997 NOTCH4Q99466 2003 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 CEP290O15078 2479 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 J3KR12 359 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 TSPAN3O60637 253 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 RAMP2O60895 175 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 PDE5AO76074 875 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 HSPA4LO95757 839 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 AP2A1O95782 977 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 ERVK-10P10266 1014 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 GJA1P17302 382 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 SGSHP51688 502 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 RPS24P62847 133 aaKnown RBP13.35□□□□□ -0.27
A1CF-204ENST00000373997 SMAD3P84022 425 aaKnown RBP13.35□□□□□ -0.27
A1CF-204ENST00000373997 KLF10Q13118 480 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 CUL3Q13618 768 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 GRM2Q14416 872 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 POLD3Q15054 466 aaPredicted RBP13.35□□□□□ -0.27
A1CF-204ENST00000373997 C9orf50Q5SZB4 431 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 ACBD5Q5T8D3 534 aaPredicted RBP13.35□□□□□ -0.27
A1CF-204ENST00000373997 FAM109BQ6ICB4 259 aaPredicted RBP13.35□□□□□ -0.27
A1CF-204ENST00000373997 RNF111Q6ZNA4 994 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 ATG14Q6ZNE5 492 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 GAREM2Q75VX8 874 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 ELMOD1Q8N336 334 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 PABPC5Q96DU9 382 aaKnown RBP13.35□□□□□ -0.27
A1CF-204ENST00000373997 IL12RB2Q99665 862 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 DDX50Q9BQ39 737 aaKnown RBP13.35□□□□□ -0.27
A1CF-204ENST00000373997 APOL2Q9BQE5 337 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 SPATA16Q9BXB7 569 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 RBM22Q9NW64 420 aaKnown RBP eCLIP13.35□□□□□ -0.27
A1CF-204ENST00000373997 ADAMTS6Q9UKP5 1117 aa13.35□□□□□ -0.27
A1CF-204ENST00000373997 AGO1Q9UL18 857 aaKnown RBP13.35□□□□□ -0.27
A1CF-204ENST00000373997 PRPF19Q9UMS4 504 aaKnown RBP13.35□□□□□ -0.27
A1CF-204ENST00000373997 SLC22A2O15244 555 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 APOA4P06727 396 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 IRS1P35568 1242 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 ACVRL1P37023 503 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 PRPSAP1Q14558 356 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 ANO4Q32M45 955 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 PABPC1LQ4VXU2 614 aaKnown RBP13.34□□□□□ -0.27
A1CF-204ENST00000373997 SFT2D3Q587I9 215 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 FRMD7Q6ZUT3 714 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 KBTBD6Q86V97 674 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 TMC8Q8IU68 726 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 MRPL43Q8N983 215 aaKnown RBP13.34□□□□□ -0.27
A1CF-204ENST00000373997 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
A1CF-204ENST00000373997 SPATA22Q8NHS9 363 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 MRPS31Q92665 395 aaKnown RBP13.34□□□□□ -0.27
A1CF-204ENST00000373997 ZFRQ96KR1 1074 aaKnown RBP13.34□□□□□ -0.27
A1CF-204ENST00000373997 CORO1BQ9BR76 489 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 COG4Q9H9E3 785 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 GLOD4Q9HC38 313 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 CPQQ9Y646 472 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 A0A1W2PRU2 124 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 ERI2A8K979 691 aaKnown RBP13.34□□□□□ -0.27
A1CF-204ENST00000373997 NRG2O14511 850 aaPredicted RBP13.34□□□□□ -0.27
A1CF-204ENST00000373997 GRM6O15303 877 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 DCXO43602 365 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 TIMM44O43615 452 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 TRIM13O60858 407 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 MT-CYBP00156 380 aaPredicted RBP13.34□□□□□ -0.27
A1CF-204ENST00000373997 VCLP18206 1134 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 HDCP19113 662 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 GLDCP23378 1020 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 HADHAP40939 763 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 MAPKAPK2P49137 400 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 CLCN2P51788 898 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 PRKAA2P54646 552 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 CSE1LP55060 971 aaKnown RBP13.34□□□□□ -0.27
A1CF-204ENST00000373997 MSLNQ13421 630 aaPredicted RBP13.34□□□□□ -0.27
A1CF-204ENST00000373997 PPM1LQ5SGD2 360 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 VWA5B1Q5TIE3 1220 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 KCTD11Q693B1 232 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 CLEC14AQ86T13 490 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 TMEM135Q86UB9 458 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 PHTF2Q8N3S3 785 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 DNAAF3Q8N9W5 541 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 SHKBP1Q8TBC3 707 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 CCDC124Q96CT7 223 aaKnown RBP13.34□□□□□ -0.27
A1CF-204ENST00000373997 CNDP1Q96KN2 507 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 SERPINI1Q99574 410 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 ATXN3LQ9H3M9 355 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 VCX3AQ9NNX9 186 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 NT5MQ9NPB1 228 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 HCFC1R1Q9NWW0 138 aa13.34□□□□□ -0.27
A1CF-204ENST00000373997 BFARQ9NZS9 450 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms