RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 GRIA4P48058 902 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 ACADVLP49748 655 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 VEGFBP49765 207 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 IDH3AP50213 366 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 ATP4BP51164 291 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 PLK1P53350 603 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 ARPP19P56211 112 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 AP2B1P63010 937 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 SLC7A9P82251 487 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 XIAPP98170 497 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 PFKPQ01813 784 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 STX5Q13190 355 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 DMC1Q14565 340 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 SPRED3Q2MJR0 410 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 MPPE1Q53F39 396 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 ALFQ53S48 1182 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 IL31Q6EBC2 164 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 HTR3DQ70Z44 454 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 TMEM151AQ8N4L1 468 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 DCAF4L2Q8NA75 395 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 TDRD5Q8NAT2 981 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 FAM13CQ8NE31 585 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 OR13J1Q8NGT2 312 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 OR6P1Q8NGX9 317 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 STAG3L4Q8TBR4 150 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 USP33Q8TEY7 942 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 TSPEARQ8WU66 669 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 MRPS31Q92665 395 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 POP5Q969H6 163 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 ISG20Q96AZ6 181 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 PDLIM5Q96HC4 596 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 ELMO2Q96JJ3 720 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 MAELQ96JY0 434 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 SCYL1Q96KG9 808 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 GPR78Q96P69 363 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 PGLYRP2Q96PD5 576 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 DEFB118Q96PH6 123 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 GCNAQ96QF7 691 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 SORT1Q99523 831 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 OMDQ99983 421 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 CLSTN3Q9BQT9 956 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 MECRQ9BV79 373 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 GATA5Q9BWX5 397 aaPredicted RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 NMUR2Q9GZQ4 415 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 RNF208Q9H0X6 261 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 COG4Q9H9E3 785 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 CYP4F11Q9HBI6 524 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 ALG13Q9NP73 1137 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 CATSPERZQ9NTU4 200 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 NDFIP2Q9NV92 336 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 UTP6Q9NYH9 597 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 TAS2R13Q9NYV9 303 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 UBP1Q9NZI7 540 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 STX18Q9P2W9 335 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 TSR3Q9UJK0 312 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 APPL1Q9UKG1 709 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 ANGPTL2Q9UKU9 493 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 CDYLQ9Y232 598 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 SLC27A5Q9Y2P5 690 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 SNX10Q9Y5X0 201 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 IRAK3Q9Y616 596 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 DOCK4Q8N1I0 1966 aa8.75□□□□□ -1.01
SNRNP40-202ENST00000373720 MYO16Q9Y6X6 1858 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 LCHNA4D1U4 455 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 ANKRD66B4E2M5 251 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 H3BNC9 293 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 EIF3FO00303 357 aaPredicted RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 ZNF195O14628 629 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 PRRG1O14668 218 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 LIN7AO14910 233 aaPredicted RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 COCHO43405 550 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 CCNT2O60583 730 aaKnown RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 GFRA3O60609 400 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 PQBP1O60828 265 aaKnown RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 SOAT2O75908 522 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 PIAS1O75925 651 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 CNTN5O94779 1100 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 VNN2O95498 520 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 S1PR4O95977 384 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 ESR1P03372 595 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 POU2F2P09086 479 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 CLTBP09497 229 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 CCL5P13501 91 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 FDXRP22570 491 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 HOXD9P28356 352 aaPredicted RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 GABRB3P28472 473 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 PTGER3P43115 390 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 MRPL19P49406 292 aaKnown RBP8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 STC1P52823 247 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 INHBCP55103 352 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 ACTR3P61158 418 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 UBE3AQ05086 875 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 SULT2A1Q06520 285 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 TUBB3Q13509 450 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 SEPT6Q14141 434 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 GPR33Q49SQ1 333 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 PPM1JQ5JR12 505 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 CDKL4Q5MAI5 379 aa8.74□□□□□ -1.01
SNRNP40-202ENST00000373720 HECTD2Q5U5R9 776 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms