RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 RAB5BP61020 215 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 PLEKHG4Q58EX7 1191 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 CCNYL2Q5T2Q4 361 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 CDKAL1Q5VV42 579 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 MMP19Q99542 508 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 NPAS2Q99743 824 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 ADAM28Q9UKQ2 775 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 PSME2Q9UL46 239 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 HACD1B0YJ81 288 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 DNAJB2P25686 324 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 EPHA3P29320 983 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 RENBPP51606 427 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 WSCD2Q2TBF2 565 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 RFKQ969G6 155 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 MKL1Q969V6 931 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 FAM126AQ9BYI3 521 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-201ENST00000371817 FAM86C2PA6NEL3 165 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 NDUFS2O75306 463 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 RAB27AP51159 221 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 CSTF1Q05048 431 aaKnown RBP15.32■□□□□ 0.04
COL5A1-201ENST00000371817 ZNF280DQ6N043 979 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 RDH11Q8TC12 318 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 ZFP14Q9HCL3 533 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 MAN2B2Q9Y2E5 1009 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 SLC25A12O75746 678 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 MSX2P35548 267 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-201ENST00000371817 MGAT5BQ3V5L5 792 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 PGBD3Q8N328 593 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 MAGEB10Q96LZ2 347 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-201ENST00000371817 NSMCE3Q96MG7 304 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 COA1Q9GZY4 146 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 NECTIN3Q9NQS3 549 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 NCKAP1Q9Y2A7 1128 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 PRMT5O14744 637 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-201ENST00000371817 AVILO75366 819 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 SLC2A2P11168 524 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-201ENST00000371817 BNIP1Q12981 228 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 USPL1Q5W0Q7 1092 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 GLT6D1Q7Z4J2 308 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 STK40Q8N2I9 435 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 PRMT7Q9NVM4 692 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-201ENST00000371817 POLR3BQ9NW08 1133 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-201ENST00000371817 MFHAS1Q9Y4C4 1052 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 C5orf51A6NDU8 294 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 ODC1P11926 461 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 QPCTQ16769 361 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 NOTUMQ6P988 496 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 AGMOQ6ZNB7 445 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 TBCCD1Q9NVR7 557 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 NDUFAF4Q9P032 175 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 ILVBLA1L0T0 632 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 AQP4P55087 323 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 PANX3Q96QZ0 392 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 MTMR12Q9C0I1 747 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 CLUHO75153 1309 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 A0A087WZ62 844 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 TOR1BO14657 336 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 OGNP20774 298 aaKnown RBP15.31■□□□□ 0.04
COL5A1-201ENST00000371817 GPSM2P81274 684 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 LRRC70Q7Z2Q7 622 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-201ENST00000371817 TBL1YQ9BQ87 522 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 ALG9Q9H6U8 611 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 TMLHEQ9NVH6 421 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 RBM22Q9NW64 420 aaKnown RBP eCLIP15.31■□□□□ 0.04
COL5A1-201ENST00000371817 KLQ9UEF7 1012 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 CDH7Q9ULB5 785 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 ZW10O43264 779 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 TYMPP19971 482 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 LHFPL3Q86UP9 236 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 GPER1Q99527 375 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 MARK1Q9P0L2 795 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 UBQLN2Q9UHD9 624 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 CFL2Q9Y281 166 aa15.31■□□□□ 0.04
COL5A1-201ENST00000371817 ZBTB14O43829 449 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 HMGCRP04035 888 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 NR2F1P10589 423 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 OR52E6Q96RD3 313 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 LPIN3Q9BQK8 851 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 PCDHGC5Q9Y5F6 944 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 ASXL2Q76L83 1435 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 A0A088AWK7 358 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 RP2O75695 350 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 ZNF10P21506 573 aaPredicted RBP15.3■□□□□ 0.04
COL5A1-201ENST00000371817 RPL9P32969 192 aaKnown RBP15.3■□□□□ 0.04
COL5A1-201ENST00000371817 CES3Q6UWW8 571 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 OR2B2Q9GZK3 357 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 ZNF69Q9UC07 566 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 PRR5-ARHGAP8B1AHC4 643 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 C6orf222P0C671 652 aaPredicted RBP15.3■□□□□ 0.04
COL5A1-201ENST00000371817 ITGB6P18564 788 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 BUD31P41223 144 aaPredicted RBP15.3■□□□□ 0.04
COL5A1-201ENST00000371817 MAN2A2P49641 1150 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 ARHGAP8P85298 464 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 RAPSNQ13702 412 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 ARL15Q9NXU5 204 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 RFXANKO14593 260 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 RNASEH1O60930 286 aaKnown RBP15.3■□□□□ 0.04
COL5A1-201ENST00000371817 LTA4HP09960 611 aaKnown RBP15.3■□□□□ 0.04
COL5A1-201ENST00000371817 HGFP14210 728 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms