RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 PPM1MQ96MI6 270 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 TMEM63AO94886 807 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 ZNF182P17025 639 aaPredicted RBP12.74□□□□□ -0.37
GPC4-201ENST00000370828 CHRNB2P17787 502 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 GARNL3Q5VVW2 1013 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 ADCK2Q7Z695 626 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 SAMD14Q8IZD0 417 aaPredicted RBP12.74□□□□□ -0.37
GPC4-201ENST00000370828 ZFP28Q8NHY6 868 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 RPRD1AQ96P16 312 aaPredicted RBP12.74□□□□□ -0.37
GPC4-201ENST00000370828 CHCHD6Q9BRQ6 235 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 TAS2R13Q9NYV9 303 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 GSTK1Q9Y2Q3 226 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 PCDHGA10Q9Y5H3 936 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 ZNF536O15090 1300 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 MEIS2O14770 477 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 BCKDKO14874 412 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 BUD23O43709 281 aaKnown RBP12.74□□□□□ -0.37
GPC4-201ENST00000370828 CDC40O60508 579 aaKnown RBP eCLIP12.74□□□□□ -0.37
GPC4-201ENST00000370828 PSMD10O75832 226 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 UGT2B4P06133 528 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 SLC2A3P11169 496 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 NFKB1P19838 968 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 TKTL1P51854 596 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 MOGQ16653 247 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 RFX4Q33E94 735 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 COLEC12Q5KU26 742 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 FAM183BPQ6ZVS7 135 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 AHSA2Q719I0 299 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 MUC3BQ9H195 1237 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 POLR3BQ9NW08 1133 aaPredicted RBP12.74□□□□□ -0.37
GPC4-201ENST00000370828 IGSF9Q9P2J2 1179 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 PCDHB12Q9Y5F1 795 aa12.74□□□□□ -0.37
GPC4-201ENST00000370828 ZC3H4Q9UPT8 1303 aaKnown RBP12.74□□□□□ -0.37
GPC4-201ENST00000370828 DNAJA2O60884 412 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 PGLSO95336 258 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 CRYZL1O95825 349 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 IFNA14P01570 189 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 NTRK1P04629 796 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 CD48P09326 243 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 CSH1P0DML2 217 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 CSH2P0DML3 217 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 ECHS1P30084 290 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 NRG1Q02297 640 aaPredicted RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 ITPK1Q13572 414 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 TGFBIQ15582 683 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 HYIQ5T013 277 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 ERICH5Q6P6B1 374 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 CCDC36Q8IYA8 594 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 CLYBLQ8N0X4 340 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 CDYL2Q8N8U2 506 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 ANKRD52Q8NB46 1076 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 LEMD2Q8NC56 503 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 TMEM161BQ8NDZ6 487 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 DCPSQ96C86 337 aaKnown RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 CRISPLD1Q9H336 500 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 PCDHGA4Q9Y5G9 962 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 ROBO3Q96MS0 1386 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 DDTLA6NHG4 134 aaPredicted RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 AZIN1O14977 448 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 AIREO43918 545 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 PSIP1O75475 530 aaKnown RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 PABPC1P11940 636 aaKnown RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 CPB1P15086 417 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 YBX3P16989 372 aaKnown RBP eCLIP12.73□□□□□ -0.37
GPC4-201ENST00000370828 MMP8P22894 467 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 DSG3P32926 999 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 HADHBP55084 474 aaKnown RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 OR2B6P58173 313 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 MAD2L1Q13257 205 aaPredicted RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 NFE2L1Q14494 772 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 TTLL9Q3SXZ7 439 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 ZACNQ401N2 412 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 ANKDD1AQ495B1 522 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 SULT1C3Q6IMI6 304 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 EIF3MQ7L2H7 374 aaKnown RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 TOP1MTQ969P6 601 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 MTFMTQ96DP5 389 aaKnown RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 SLC47A1Q96FL8 570 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 ZSCAN5AQ9BUG6 496 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 ZFP14Q9HCL3 533 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 VAV3Q9UKW4 847 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 CNOT6Q9ULM6 557 aaKnown RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 TBC1D30Q9Y2I9 924 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 K7EPI3 171 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 SH3BGRLO75368 114 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 FMO4P31512 558 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 MOGSQ13724 837 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 FSCN1Q16658 493 aaKnown RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 PCID2Q5JVF3 399 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 RNF219Q5W0B1 726 aaPredicted RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 C11orf96Q7Z7L8 435 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 PHTF2Q8N3S3 785 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 CANT1Q8WVQ1 401 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 HSD17B14Q9BPX1 270 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 WDR18Q9BV38 432 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 ZNF717Q9BY31 904 aaPredicted RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 CCDC177Q9NQR7 707 aaPredicted RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 IFT80Q9P2H3 777 aaPredicted RBP12.73□□□□□ -0.37
GPC4-201ENST00000370828 ADGRE2Q9UHX3 823 aa12.73□□□□□ -0.37
GPC4-201ENST00000370828 TK2O00142 265 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms