RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ACSS3Q9H6R3 686 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 ROPN1Q9HAT0 212 aaPredicted RBP12.37□□□□□ -0.43
TUBE1-202ENST00000368662 PRSS16Q9NQE7 514 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 WNT16Q9UBV4 365 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 FETUBQ9UGM5 382 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 PPM1HQ9ULR3 514 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 ANKRD36A6QL64 1941 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 COL6A3P12111 3177 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 C1QTNF3-AMACRE9PGA6 284 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 RNASEH1O60930 286 aaKnown RBP12.37□□□□□ -0.43
TUBE1-202ENST00000368662 TCEA3O75764 348 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 SASH3O75995 380 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 CTSLP07711 333 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 SLC8A1P32418 973 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 GPS2Q13227 327 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 CAMK2GQ13555 558 aaPredicted RBP12.37□□□□□ -0.43
TUBE1-202ENST00000368662 SKIDA1Q1XH10 827 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 FAM46CQ5VWP2 391 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 CNPY4Q8N129 248 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 ZNF669Q96BR6 464 aaPredicted RBP12.37□□□□□ -0.43
TUBE1-202ENST00000368662 SCRN2Q96FV2 425 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 SHDQ96IW2 340 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 ACOX2Q99424 681 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 MTG2Q9H4K7 406 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 MOCS1Q9NZB8 636 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 MRPS17Q9Y2R5 130 aaKnown RBP12.37□□□□□ -0.43
TUBE1-202ENST00000368662 NFS1Q9Y697 457 aa12.37□□□□□ -0.43
TUBE1-202ENST00000368662 ZCWPW2A0A1B0GU75 182 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 EXOC1LA0A1B0GW35 172 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 CAPN8A6NHC0 703 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 GOLGA6L10A6NI86 522 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 LDB2O43679 373 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 SUOXP51687 545 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 CCINQ13939 588 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 LONRF1Q17RB8 773 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 C2orf27AQ580R0 203 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 TSTD2Q5T7W7 516 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 UBALD2Q8IYN6 164 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 IL17RCQ8NAC3 791 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 GABPB2Q8TAK5 448 aaPredicted RBP12.36□□□□□ -0.43
TUBE1-202ENST00000368662 UHMK1Q8TAS1 419 aaKnown RBP12.36□□□□□ -0.43
TUBE1-202ENST00000368662 PIP4K2CQ8TBX8 421 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 STYXQ8WUJ0 223 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 MFSD3Q96ES6 412 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 MCCC1Q96RQ3 725 aaPredicted RBP12.36□□□□□ -0.43
TUBE1-202ENST00000368662 FAM129BQ96TA1 746 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 TMEM109Q9BVC6 243 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 PLAC1Q9HBJ0 212 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 DYRK4Q9NR20 520 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 ARHGEF3Q9NR81 526 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 TREX1Q9NSU2 369 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 RABGEF1Q9UJ41 708 aa12.36□□□□□ -0.43
TUBE1-202ENST00000368662 KPNA3O00505 521 aaPredicted RBP12.35□□□□□ -0.43
TUBE1-202ENST00000368662 XPAP23025 273 aaPredicted RBP12.35□□□□□ -0.43
TUBE1-202ENST00000368662 ITGB7P26010 798 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 UGP2Q16851 508 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 UBAP2Q5T6F2 1119 aaKnown RBP12.35□□□□□ -0.43
TUBE1-202ENST00000368662 PDPK2PQ6A1A2 396 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 KIAA0930Q6ICG6 404 aaPredicted RBP12.35□□□□□ -0.43
TUBE1-202ENST00000368662 SYNPOQ8N3V7 929 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 GOLGA6L1Q8N7Z2 621 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 CERS2Q96G23 380 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 C16orf96A6NNT2 1141 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 UPK3BL1B0FP48 263 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 UPK3BL2E5RIL1 263 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 OPA1O60313 960 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 ADH1BP00325 375 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 IL1BP01584 269 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 SHBGP04278 402 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 PIRTP0C851 137 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 CHRM1P11229 460 aaPredicted RBP12.35□□□□□ -0.43
TUBE1-202ENST00000368662 CYP2A6P11509 494 aaPredicted RBP12.35□□□□□ -0.43
TUBE1-202ENST00000368662 LPOP22079 712 aaPredicted RBP12.35□□□□□ -0.43
TUBE1-202ENST00000368662 NMBRP28336 390 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 HNF1BP35680 557 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 HMGCLP35914 325 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 HADHAP40939 763 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 ABL2P42684 1182 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 FAM193AP78312 1265 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 ZNF844Q08AG5 666 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 CCDC15Q0P6D6 951 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 NAB1Q13506 487 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 CEP85LQ5SZL2 805 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 IER5LQ5T953 404 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 ERAP2Q6P179 960 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 CES3Q6UWW8 571 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 LRRC6Q86X45 466 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 ZSWIM9Q86XI8 627 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 MDGA1Q8NFP4 955 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 OR2W6PQ8NHA6 318 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 ZNF778Q96MU6 729 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 FCRL3Q96P31 734 aaPredicted RBP12.35□□□□□ -0.43
TUBE1-202ENST00000368662 TRIM56Q9BRZ2 755 aaKnown RBP12.35□□□□□ -0.43
TUBE1-202ENST00000368662 GPR63Q9BZJ6 419 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 RSPH9Q9H1X1 276 aaPredicted RBP12.35□□□□□ -0.43
TUBE1-202ENST00000368662 ZFYVE1Q9HBF4 777 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 PPANQ9NQ55 473 aaKnown RBP12.35□□□□□ -0.43
TUBE1-202ENST00000368662 VPS18Q9P253 973 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 SLC24A2Q9UI40 661 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 FBXL21Q9UKT6 434 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms