RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PDCD6IPQ8WUM4 868 aaKnown RBP10.73□□□□□ -0.69
TPM3-212ENST00000368533 ARNTL2Q8WYA1 636 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 EBF4Q9BQW3 602 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 KCNK4Q9NYG8 393 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 PCDHGB4Q9UN71 923 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 DOLKQ9UPQ8 538 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 DNAJC16Q9Y2G8 782 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 PCDHGB5Q9Y5G0 923 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 MEI4A8MW99 385 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 BPGMP07738 259 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 CDK4P11802 303 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 SLC11A2P49281 568 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 COG7P83436 770 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 DLG1Q12959 904 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 PPM1JQ5JR12 505 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 NCCRP1Q6ZVX7 275 aaPredicted RBP10.73□□□□□ -0.69
TPM3-212ENST00000368533 BEND5Q7L4P6 421 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 RASSF3Q86WH2 238 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 TREML1Q86YW5 311 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 TTLL2Q9BWV7 592 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 C20orf27Q9GZN8 174 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 MUC3BQ9H195 1237 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 TLR9Q9NR96 1032 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 SLC2A6Q9UGQ3 507 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 KIAA1671Q9BY89 1806 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 DOCK4Q8N1I0 1966 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 PLXNA3P51805 1871 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 LINC01553A4QN01 128 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 FAM159BA6NKW6 160 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 PRR5-ARHGAP8B1AHC4 643 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 RFXAPO00287 272 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 TBL1XO60907 577 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 BAIAP3O94812 1187 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 CCDC166P0CW27 439 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 RHOQP17081 205 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 NCF2P19878 526 aaPredicted RBP10.72□□□□□ -0.69
TPM3-212ENST00000368533 TPSB2P20231 275 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 NMBRP28336 390 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 PPM1AP35813 382 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 ARHGAP8P85298 464 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 SMARCB1Q12824 385 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 TPSAB1Q15661 275 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 SLC44A4Q53GD3 710 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 SFT2D3Q587I9 215 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 HSP90AA5PQ58FG0 334 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 CES4AQ5XG92 561 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 TPGS2Q68CL5 300 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 C4orf22Q6V702 233 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 PGBD5Q8N414 524 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 POU5F2Q8N7G0 328 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 RBM15BQ8NDT2 890 aaKnown RBP10.72□□□□□ -0.69
TPM3-212ENST00000368533 RIN3Q8TB24 985 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 PPP4R1Q8TF05 950 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 PYDC1Q8WXC3 89 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 NR1H4Q96RI1 486 aaPredicted RBP10.72□□□□□ -0.69
TPM3-212ENST00000368533 RAD9AQ99638 391 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 IL21Q9HBE4 155 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 GLOD4Q9HC38 313 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 CFAP97Q9P2B7 532 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 CLEC4EQ9ULY5 219 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 HMX2A2RU54 273 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 MATN3O15232 486 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 NCAM2O15394 837 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 AP2A1O95782 977 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 MZF1P28698 734 aaPredicted RBP10.72□□□□□ -0.69
TPM3-212ENST00000368533 WEE1P30291 646 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 CRHR1P34998 444 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 NIPAL4Q0D2K0 466 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 GALNT3Q14435 633 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 MARC1Q5VT66 337 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 ZNF554Q86TJ5 538 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 TLE6Q9H808 572 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 IGSF9Q9P2J2 1179 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 LTBP2Q14767 1821 aa10.72□□□□□ -0.69
TPM3-212ENST00000368533 H0Y626 953 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 ITM2AO43736 263 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 GLUD1P00367 558 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 IGLV3-27P01718 113 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 C1QAP02745 245 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 PABPC4LP0CB38 370 aaKnown RBP10.71□□□□□ -0.69
TPM3-212ENST00000368533 CCNCP24863 283 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 RGRP47804 291 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 C1orf146Q5VVC0 180 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 RIPOR1Q6ZS17 1223 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 BBS7Q8IWZ6 715 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 DDI1Q8WTU0 396 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 C7orf26Q96N11 449 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 LIN28AQ9H9Z2 209 aaKnown RBP10.71□□□□□ -0.69
TPM3-212ENST00000368533 ATP13A1Q9HD20 1204 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 MAN1C1Q9NR34 630 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 THAP1Q9NVV9 213 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 ZNF212Q9UDV6 495 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 APOBEC2Q9Y235 224 aaKnown RBP10.71□□□□□ -0.69
TPM3-212ENST00000368533 SH3GLB1Q9Y371 365 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 HBS1LQ9Y450 684 aaKnown RBP10.71□□□□□ -0.69
TPM3-212ENST00000368533 LOC100653049A0A140TA62 436 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 VILLO15195 856 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 DNAJC6O75061 913 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 KRT34O76011 436 aa10.71□□□□□ -0.69
TPM3-212ENST00000368533 SORBS2O94875 1100 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms