RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 EIF2S3P41091 472 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 ABCG1P45844 678 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 STAT5BP51692 787 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 CCNG1P51959 295 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 GEMIN4P57678 1058 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 NLRP11P59045 1033 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 ELF3P78545 371 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 SP4Q02446 784 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 TFDP2Q14188 446 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 OASLQ15646 514 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 PDK4Q16654 411 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 FAM187BQ17R55 369 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 LONRF1Q17RB8 773 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 SLC5A9Q2M3M2 681 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 P3H1Q32P28 736 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 C2orf27AQ580R0 203 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 ACBD5Q5T8D3 534 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 FYB2Q5VWT5 728 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 AADACL2Q6P093 401 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 APBB1IPQ7Z5R6 666 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 APLFQ8IW19 511 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 CCDC60Q8IWA6 550 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 MAP7D3Q8IWC1 876 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 PDIK1LQ8N165 341 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 ATP11CQ8NB49 1132 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 TMEM52Q8NDY8 209 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 SLC35B2Q8TB61 432 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 DENND1AQ8TEH3 1009 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 DNASE1L2Q92874 299 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 LRRC39Q96DD0 335 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 ANKRD36BP1Q96IX9 119 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 KIRREL1Q96J84 757 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 TSPAN18Q96SJ8 248 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 PPP1R16BQ96T49 567 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 C11orf70Q9BRQ4 267 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 VPS11Q9H270 941 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 ASB7Q9H672 318 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 RSAD1Q9HA92 442 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 ZNF334Q9HCZ1 680 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 KCNK9Q9NPC2 374 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 TBC1D13Q9NVG8 400 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 HCFC1R1Q9NWW0 138 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 MARCH5Q9NX47 278 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 PSMC3IPQ9P2W1 217 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 PIAS3Q9Y6X2 628 aa6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 KIF26AQ9ULI4 1882 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-202ENST00000368289 KNL1Q8NG31 2342 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 TRBV23-1A0A0A0MS06 115 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 IQANK1A0A1B0GTG1 560 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 TRABD2BA6NFA1 517 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 LRRIQ4A6NIV6 560 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 ENO4A6NNW6 628 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 APOC4-APOC2K7ER74 178 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 ACKR2O00590 384 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 TRDMT1O14717 391 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 LIN7AO14910 233 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 KIF1CO43896 1103 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 NPHS1O60500 1241 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 GPR32O75388 356 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 DDHD2O94830 711 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 UNC5CO95185 931 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 LUC7L3O95232 432 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 ATP6V1G2O95670 118 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 APOC2P02655 101 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 KRT1P04264 644 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 SETSIPP0DME0 302 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 TROVE2P10155 538 aaKnown RBP eCLIP6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 RPL17P18621 184 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 PROZP22891 400 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 CDKN2BP42772 138 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 GABRB2P47870 512 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 ARSEP51690 589 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 CDC42EP1Q00587 391 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 KCNAB2Q13303 367 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 LAPTM5Q13571 262 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 SNX1Q13596 522 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 PDK2Q15119 407 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 PCBP1Q15365 356 aaKnown RBP eCLIP6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 SEPT7Q16181 437 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 HSF5Q4G112 596 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 SLC45A4Q5BKX6 768 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 CMPK2Q5EBM0 449 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 RNASEH2BQ5TBB1 312 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 MPZL3Q6UWV2 235 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 CYS1Q717R9 158 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 ASRGL1Q7L266 308 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 ARCQ7LC44 396 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 ZDHHC17Q8IUH5 632 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 SLC4A11Q8NBS3 891 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 RNF169Q8NCN4 708 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 RAB3IL1Q8TBN0 382 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 LRRC8CQ8TDW0 803 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 ING5Q8WYH8 240 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 DIO2Q92813 273 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 LPPQ93052 612 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 HAUS1Q96CS2 278 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 KLHL29Q96CT2 875 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 B3GALT6Q96L58 329 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 TBCBQ99426 244 aa6.61□□□□□ -1.35
ECHDC1-202ENST00000368289 ACO2Q99798 780 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms