RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 FAM110AQ9BQ89 295 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 QTRT1Q9BXR0 403 aaKnown RBP3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 TEX12Q9BXU0 123 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 TASP1Q9H6P5 420 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 MAP6D1Q9H9H5 199 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 PDE7BQ9NP56 450 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 TMEM184CQ9NVA4 438 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 MSRB1Q9NZV6 116 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 CHORDC1Q9UHD1 332 aaPredicted RBP3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 NFE2L3Q9Y4A8 694 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 CEPT1Q9Y6K0 416 aa3.87□□□□□ -1.79
RNU6-28P-201ENST00000362378 STMND1H3BQB6 276 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 MDM4O15151 490 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 ATP2C2O75185 946 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 KLKB1P03952 638 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 SLPIP03973 132 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 CHRNB1P11230 501 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 SELLP14151 372 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 TMEM11P17152 192 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 CHATP28329 748 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 HOXD9P28356 352 aaPredicted RBP3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 AVPR1AP37288 418 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 HSD17B4P51659 736 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 PMS2P54278 862 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 CDH12P55289 794 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 PSMC6P62333 389 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 IRX6P78412 446 aaPredicted RBP3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 GAD2Q05329 585 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 CALD1Q05682 793 aaKnown RBP3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 CAPSQ13938 189 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 PCLAFQ15004 111 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 NTRK2Q16620 822 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 PCGF3Q3KNV8 242 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 GPR139Q6DWJ6 353 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 SLC18B1Q6NT16 456 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 SLC30A6Q6NXT4 461 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 RPUSD3Q6P087 351 aaKnown RBP3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 CFAP77Q6ZQR2 320 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 SEPT14Q6ZU15 432 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 KRT77Q7Z794 578 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 SLC35F3Q8IY50 421 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 TEX11Q8IYF3 940 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 HACE1Q8IYU2 909 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 RNF168Q8IYW5 571 aaPredicted RBP3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 PARP16Q8N5Y8 322 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 BEST2Q8NFU1 509 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 HUS1BQ8NHY5 278 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 SLC22A18Q96BI1 424 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 OTULINQ96BN8 352 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 PPP1R13BQ96KQ4 1090 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 WDR77Q9BQA1 342 aaPredicted RBP3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 MSTO1Q9BUK6 570 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 PRSS22Q9GZN4 317 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 NPFFR1Q9GZQ6 430 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 LHPPQ9H008 270 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 DDX4Q9NQI0 724 aaKnown RBP3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 ADARB2Q9NS39 739 aaKnown RBP3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 GIMAP4Q9NUV9 329 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 OGFRQ9NZT2 677 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 NFKBIL1Q9UBC1 381 aaPredicted RBP3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 SEC63Q9UGP8 760 aaKnown RBP3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 NENFQ9UMX5 172 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 PCDHA12Q9UN75 941 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 RAI2Q9Y5P3 530 aa3.86□□□□□ -1.79
RNU6-28P-201ENST00000362378 OR2A25A4D2G3 310 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 CHL1O00533 1208 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 ADAM20O43506 726 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 HS6ST1O60243 411 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 DKC1O60832 514 aaKnown RBP eCLIP3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 DAB1O75553 588 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 MTA2O94776 668 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 TFPIP10646 304 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 IL7RP16871 459 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 CHRNB2P17787 502 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 SAT1P21673 171 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 MYF6P23409 242 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 PON1P27169 355 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 ARHGAP25P42331 645 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 PPP3CCP48454 512 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 CAMPP49913 170 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 MRPL12P52815 198 aaKnown RBP3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 ZBED6P86452 979 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 TFAP4Q01664 338 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 SRSF1Q07955 248 aaKnown RBP eCLIP3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 ITGADQ13349 1161 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 ARHGEF6Q15052 776 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 INPP5JQ15735 1006 aaPredicted RBP3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 DUSP6Q16828 381 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 ZSCAN23Q3MJ62 389 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 SUPT20HL1Q3ZLR7 823 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 CDONQ4KMG0 1287 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 DCAF6Q58WW2 860 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 EPHA10Q5JZY3 1008 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 Q5PR19 223 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 GARNL3Q5VVW2 1013 aa3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 FBXO46Q6PJ61 603 aaPredicted RBP3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 YTHDF3Q7Z739 585 aaKnown RBP3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 PATL1Q86TB9 770 aaKnown RBP3.85□□□□□ -1.79
RNU6-28P-201ENST00000362378 TSPAN33Q86UF1 283 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms