RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CLCN5P51795 746 aa13.96□□□□□ -0.18
COL6A1-201ENST00000361866 TBX4P57082 545 aa13.96□□□□□ -0.18
COL6A1-201ENST00000361866 CNSTQ6PJW8 725 aa13.96□□□□□ -0.18
COL6A1-201ENST00000361866 ZNF410Q86VK4 478 aa13.96□□□□□ -0.18
COL6A1-201ENST00000361866 PSMA8Q8TAA3 256 aa13.96□□□□□ -0.18
COL6A1-201ENST00000361866 STAG3L4Q8TBR4 150 aa13.96□□□□□ -0.18
COL6A1-201ENST00000361866 FZD8Q9H461 694 aa13.96□□□□□ -0.18
COL6A1-201ENST00000361866 OXSMQ9NWU1 459 aa13.96□□□□□ -0.18
COL6A1-201ENST00000361866 ZNF112Q9UJU3 913 aa13.96□□□□□ -0.18
COL6A1-201ENST00000361866 INVSQ9Y283 1065 aa13.96□□□□□ -0.18
COL6A1-201ENST00000361866 SH3GLB1Q9Y371 365 aa13.96□□□□□ -0.18
COL6A1-201ENST00000361866 C17orf102A2RUQ5 167 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 SNAP91O60641 907 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 FAM20BO75063 409 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 TFPTP0C1Z6 253 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 ALDH4A1P30038 563 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 PPP3CCP48454 512 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 GALNT3Q14435 633 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 ZNF280DQ6N043 979 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 OR8H2Q8N162 312 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 OR56A4Q8NGH8 313 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 TRIM8Q9BZR9 551 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 NDEL1Q9GZM8 345 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 REXO4Q9GZR2 422 aaKnown RBP13.95□□□□□ -0.18
COL6A1-201ENST00000361866 CLPBQ9H078 707 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 ZNF556Q9HAH1 456 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 FBRSL1Q9HCM7 1045 aaKnown RBP13.95□□□□□ -0.18
COL6A1-201ENST00000361866 PRDM5Q9NQX1 630 aaPredicted RBP13.95□□□□□ -0.18
COL6A1-201ENST00000361866 GIMAP2Q9UG22 337 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 ZNHIT2Q9UHR6 403 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 CHD4Q14839 1912 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 EI24O14681 340 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 DLX3O60479 287 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 ATG7O95352 703 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 HK2P52789 917 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 MTTPP55157 894 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 BNIP3Q12983 259 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 CBX3Q13185 183 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 DPYSQ14117 519 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 GPSM1Q86YR5 675 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 GATA6Q92908 595 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 KLQ9UEF7 1012 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 TUBGCP6Q96RT7 1819 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 PIGRP01833 764 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 UGT1A6P19224 532 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 GRM5P41594 1212 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 PITX1P78337 314 aaPredicted RBP13.95□□□□□ -0.18
COL6A1-201ENST00000361866 RUNX1T1Q06455 604 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 SLC10A2Q12908 348 aaPredicted RBP13.95□□□□□ -0.18
COL6A1-201ENST00000361866 PRKG2Q13237 762 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 POTEHQ6S545 545 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 GLT6D1Q7Z4J2 308 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 LZTR1Q8N653 840 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 TPD52L3Q96J77 140 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 TBATAQ96M53 351 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 TIAM2Q8IVF5 1701 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 CELF2O95319 508 aaKnown RBP13.95□□□□□ -0.18
COL6A1-201ENST00000361866 SIX3O95343 332 aaPredicted RBP13.95□□□□□ -0.18
COL6A1-201ENST00000361866 ARIH2O95376 493 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 CST1P01037 141 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 ZNF37AP17032 561 aaPredicted RBP13.95□□□□□ -0.18
COL6A1-201ENST00000361866 HECTD2Q5U5R9 776 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 RAP1GAP2Q684P5 730 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 OLFML1Q6UWY5 402 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 LRRC52Q8N7C0 313 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 GPR152Q8TDT2 470 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 BORCS5Q969J3 196 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 KANSL3Q9P2N6 904 aa13.95□□□□□ -0.18
COL6A1-201ENST00000361866 F5H5T6 163 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 RGS20O76081 388 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 CCDC159P0C7I6 412 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 DNAJB2P25686 324 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 EPHX2P34913 555 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 RECQLP46063 649 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-201ENST00000361866 HARS2P49590 506 aaKnown RBP13.94□□□□□ -0.18
COL6A1-201ENST00000361866 ENTPD1P49961 510 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 TNK2Q07912 1038 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 MAPRE1Q15691 268 aaKnown RBP13.94□□□□□ -0.18
COL6A1-201ENST00000361866 NOMO2Q5JPE7 1267 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 DEPDC1Q5TB30 811 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 OGFOD2Q6N063 350 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 EPGNQ6UW88 154 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 TMEM26Q6ZUK4 368 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 FAM35AQ86V20 835 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 TP53INP2Q8IXH6 220 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 TRPM4Q8TD43 1214 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 ITFG2Q969R8 447 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 OSBPL6Q9BZF3 934 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 C20orf27Q9GZN8 174 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 OAZ3Q9UMX2 235 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 CBFA2T3O75081 653 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 PRDX6P30041 224 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 PAGE2BQ5JRK9 111 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 RSBN1Q5VWQ0 802 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-201ENST00000361866 TTC23Q5W5X9 447 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 TMC5Q6UXY8 1006 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 LBX2Q6XYB7 198 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 HFE2Q6ZVN8 426 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 DCP1BQ8IZD4 617 aaKnown RBP13.94□□□□□ -0.18
COL6A1-201ENST00000361866 AHI1Q8N157 1196 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms