RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 PACS1Q6VY07 963 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 RASAL3Q86YV0 1011 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 POMGNT2Q8NAT1 580 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 BCAS3Q9H6U6 928 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 NMUR1Q9HB89 426 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 ERVK-5Q9HDB9 667 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 COG5Q9UP83 839 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 OR10H1Q9Y4A9 318 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 A0A1B0GVM2 712 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 TCAF2A6NFQ2 919 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 KCNU1A8MYU2 1149 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 CNOT3O75175 753 aaKnown RBP18.64■□□□□ 0.57
CLIP2-202ENST00000361545 CD48P09326 243 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 CCL5P13501 91 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 WARSP23381 471 aaKnown RBP18.64■□□□□ 0.57
CLIP2-202ENST00000361545 PCYT1AP49585 367 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 ERVK-21P61565 698 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 JAG1P78504 1218 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 SEMA5AQ13591 1074 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 CBX2Q14781 532 aaPredicted RBP18.64■□□□□ 0.57
CLIP2-202ENST00000361545 SCAMP5Q8TAC9 235 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 DNAJC1Q96KC8 554 aaKnown RBP18.64■□□□□ 0.57
CLIP2-202ENST00000361545 C1orf50Q9BV19 199 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 RAD21L1Q9H4I0 556 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 KCNK4Q9NYG8 393 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 CLUHO75153 1309 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 UBE2R2Q712K3 238 aaPredicted RBP18.64■□□□□ 0.57
CLIP2-202ENST00000361545 PHYKPLQ8IUZ5 450 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 LTN1O94822 1766 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 NRP1O14786 923 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 OTCP00480 354 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 TTMPQ5BVD1 217 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 SAMD4BQ5PRF9 694 aaKnown RBP18.63■□□□□ 0.57
CLIP2-202ENST00000361545 ARHGAP17Q68EM7 881 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 TMEM79Q9BSE2 394 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 UGT2B28Q9BY64 529 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 RHOBTB2Q9BYZ6 727 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 FEN1P39748 380 aaKnown RBP18.63■□□□□ 0.57
CLIP2-202ENST00000361545 CXCR3P49682 368 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 ATP6V0D1P61421 351 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 BST1Q10588 318 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 FBXO30Q8TB52 745 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 RCOR3Q9P2K3 495 aaPredicted RBP18.63■□□□□ 0.57
CLIP2-202ENST00000361545 TMCO1Q9UM00 188 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 ABHD2P08910 425 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 MYBL2P10244 700 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 HGFP14210 728 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 PBX1P40424 430 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 RGS1Q08116 209 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 OASLQ15646 514 aaKnown RBP18.63■□□□□ 0.57
CLIP2-202ENST00000361545 HGSNATQ68CP4 663 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 KRT73Q86Y46 540 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 KLHL3Q9UH77 587 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 ABCC6O95255 1503 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 ZMPSTE24O75844 475 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 PCCBP05166 539 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 FYNP06241 537 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 CDH4P55283 916 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 YBEYP58557 167 aaPredicted RBP18.63■□□□□ 0.57
CLIP2-202ENST00000361545 COPZ1P61923 177 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 MRPL28Q13084 256 aaKnown RBP18.63■□□□□ 0.57
CLIP2-202ENST00000361545 OLFML2BQ68BL8 750 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 PAGE2Q7Z2X7 111 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 ZC3H7AQ8IWR0 971 aaKnown RBP18.63■□□□□ 0.57
CLIP2-202ENST00000361545 HMCESQ96FZ2 354 aa18.63■□□□□ 0.57
CLIP2-202ENST00000361545 C15orf38-AP3S2A0A0A6YYH1 394 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 VAV1P15498 845 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 DAOAP59103 153 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 ARPINQ7Z6K5 226 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 EIF1ADQ8N9N8 165 aaKnown RBP18.62■□□□□ 0.57
CLIP2-202ENST00000361545 GLMNQ92990 594 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 RIPOR3Q96MK2 946 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 C5orf60A6NFR6 353 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 URADA6NGE7 173 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 YJEFN3A6XGL0 299 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 E7ENQ6 273 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 OR6A2O95222 327 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 LRATO95237 230 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 LINC00032P0C843 101 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 TSHRP16473 764 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 GPR141Q7Z602 305 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 SPATA22Q8NHS9 363 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 RIBC2Q9H4K1 309 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 ZC4H2Q9NQZ6 224 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 MON2Q7Z3U7 1717 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 CCL22O00626 93 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 RPP40O75818 363 aaKnown RBP18.62■□□□□ 0.57
CLIP2-202ENST00000361545 PRNPP04156 253 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 ITPKAP23677 461 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 LDB1Q86U70 411 aaPredicted RBP18.62■□□□□ 0.57
CLIP2-202ENST00000361545 PPP3R2Q96LZ3 170 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 MBOAT7Q96N66 472 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 ARHGEF4Q9NR80 690 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 CHRAC1Q9NRG0 131 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 PARP4Q9UKK3 1724 aaKnown RBP18.62■□□□□ 0.57
CLIP2-202ENST00000361545 ALOX15BO15296 676 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 PIWIL4Q7Z3Z4 852 aaKnown RBP18.62■□□□□ 0.57
CLIP2-202ENST00000361545 COMMD2Q86X83 199 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 ASZ1Q8WWH4 475 aa18.62■□□□□ 0.57
CLIP2-202ENST00000361545 OSBPL6Q9BZF3 934 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms