RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 FZD10Q9ULW2 581 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 ATP8A1Q9Y2Q0 1164 aa21.25■□□□□ 0.99
CD47-202ENST00000361309 HEMK1Q9Y5R4 338 aaPredicted RBP21.25■□□□□ 0.99
CD47-202ENST00000361309 GLB1P16278 677 aa21.24■□□□□ 0.99
CD47-202ENST00000361309 EEF1GP26641 437 aaKnown RBP21.24■□□□□ 0.99
CD47-202ENST00000361309 ZFP36L1Q07352 338 aaKnown RBP21.24■□□□□ 0.99
CD47-202ENST00000361309 CERCAMQ5T4B2 595 aa21.24■□□□□ 0.99
CD47-202ENST00000361309 BRAT1Q6PJG6 821 aa21.24■□□□□ 0.99
CD47-202ENST00000361309 OGFOD3Q6PK18 319 aa21.24■□□□□ 0.99
CD47-202ENST00000361309 TAF8Q7Z7C8 310 aa21.24■□□□□ 0.99
CD47-202ENST00000361309 CAMK1DQ8IU85 385 aa21.24■□□□□ 0.99
CD47-202ENST00000361309 FAM46DQ8NEK8 389 aa21.24■□□□□ 0.99
CD47-202ENST00000361309 ARHGAP9Q9BRR9 750 aa21.24■□□□□ 0.99
CD47-202ENST00000361309 VPS16Q9H269 839 aa21.24■□□□□ 0.99
CD47-202ENST00000361309 PDFQ9HBH1 243 aa21.24■□□□□ 0.99
CD47-202ENST00000361309 UBR5O95071 2799 aaPredicted RBP21.24■□□□□ 0.99
CD47-202ENST00000361309 SDK2Q58EX2 2172 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 PRAMEF33A0A0G2JMD5 474 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 TMEM202A6NGA9 273 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 SIGLEC16A6NMB1 481 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 J3KR12 359 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 EPHB6O15197 1021 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 PRAMEF10O60809 474 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 CALB1P05937 261 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 ETV5P41161 510 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 CLEC16AQ2KHT3 1053 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 SPRED1Q7Z699 444 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 C3orf20Q8ND61 904 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 OR56A4Q8NGH8 313 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 FUBP1Q96AE4 644 aaKnown RBP21.23■□□□□ 0.99
CD47-202ENST00000361309 FGF22Q9HCT0 170 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 MRPL40Q9NQ50 206 aaKnown RBP21.23■□□□□ 0.99
CD47-202ENST00000361309 RNF215Q9Y6U7 377 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 PTPN13Q12923 2485 aa21.23■□□□□ 0.99
CD47-202ENST00000361309 CACNB4O00305 520 aaPredicted RBP21.22■□□□□ 0.99
CD47-202ENST00000361309 ARHGAP6O43182 974 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 ITGB2P05107 769 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 PNLIPP16233 465 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 STAT1P42224 750 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 RGRP47804 291 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 ZNF143P52747 638 aaPredicted RBP21.22■□□□□ 0.99
CD47-202ENST00000361309 KIAA1024LP59773 190 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 C14orf28Q4W4Y0 310 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 MANEAQ5SRI9 462 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 XKR5Q6UX68 686 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 TMPRSS9Q7Z410 1059 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 VASH2Q86V25 355 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 ZFAND4Q86XD8 727 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 PHF13Q86YI8 300 aaPredicted RBP21.22■□□□□ 0.99
CD47-202ENST00000361309 TMEM159Q96B96 161 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 CELF6Q96J87 481 aaKnown RBP21.22■□□□□ 0.99
CD47-202ENST00000361309 TUBGCP5Q96RT8 1024 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 TRIM4Q9C037 500 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 TMEM168Q9H0V1 697 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 LRRC19Q9H756 370 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 SEPT10Q9P0V9 454 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 LRIT1Q9P2V4 623 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 BSNQ9UPA5 3926 aa21.22■□□□□ 0.99
CD47-202ENST00000361309 B4DGG1 531 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 FGF10O15520 208 aaPredicted RBP21.21■□□□□ 0.99
CD47-202ENST00000361309 PRAMEF11O60813 436 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 RECQL5O94762 991 aaPredicted RBP21.21■□□□□ 0.99
CD47-202ENST00000361309 CSRP3P50461 194 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 MAPK10P53779 464 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 RPL7AP62424 266 aaKnown RBP21.21■□□□□ 0.99
CD47-202ENST00000361309 NFKB2Q00653 900 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 RALGDSQ12967 914 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 ARHGEF7Q14155 803 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 HLTFQ14527 1009 aaKnown RBP eCLIP21.21■□□□□ 0.99
CD47-202ENST00000361309 SRLQ86TD4 932 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 CCL4L1Q8NHW4 92 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 USP7Q93009 1102 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 MCEEQ96PE7 176 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 CMKLR1Q99788 373 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 DPEP2Q9H4A9 486 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 ATP13A3Q9H7F0 1226 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 STARD5Q9NSY2 213 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 FOXJ2Q9P0K8 574 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 COL12A1Q99715 3063 aa21.21■□□□□ 0.99
CD47-202ENST00000361309 TCRBV5S1A1TA0A578 114 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 CFAP69A5D8W1 941 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 FAM87AP0C7U9 286 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 SERPINA4P29622 427 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 AIF1P55008 147 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 TPI1P60174 286 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 PHF19Q5T6S3 580 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 SPECC1LQ69YQ0 1117 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 DNAJC24Q6P3W2 148 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 LIPIQ6XZB0 460 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 MON1BQ7L1V2 547 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 SLITRK4Q8IW52 837 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 TSEN2Q8NCE0 465 aaKnown RBP21.2■□□□□ 0.98
CD47-202ENST00000361309 SEMA6CQ9H3T2 930 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 CYP4F12Q9HCS2 524 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 SEPT11Q9NVA2 429 aaKnown RBP21.2■□□□□ 0.98
CD47-202ENST00000361309 IL17BQ9UHF5 180 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 MOSPD1Q9UJG1 213 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 PCDHGA4Q9Y5G9 962 aa21.2■□□□□ 0.98
CD47-202ENST00000361309 ZFC3H1O60293 1989 aaKnown RBP21.19■□□□□ 0.98
CD47-202ENST00000361309 ANKRD62A6NC57 917 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms