RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 SPO11Q9Y5K1 396 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 ARL5AQ9Y689 179 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 OTOL1A6NHN0 477 aaPredicted RBP21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 SLC7A4O43246 635 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 TYROBPO43914 113 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 ECI2O75521 394 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 POP4O95707 220 aaKnown RBP21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 ITGA2BP08514 1039 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 DLDP09622 509 aaKnown RBP21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 PIRTP0C851 137 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 PSMA3P25788 255 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 SERPINA4P29622 427 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 RAD51Q06609 339 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 BMPR2Q13873 1038 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 GRM3Q14832 879 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 ZSCAN26Q16670 478 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 UGP2Q16851 508 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 GRAMD4Q6IC98 578 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 RYBPQ8N488 228 aaPredicted RBP21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 ST13P5Q8NFI4 369 aaPredicted RBP21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 PIH1D2Q8WWB5 315 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 SPOCK2Q92563 424 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 MCMBPQ9BTE3 642 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 PLA2G2FQ9BZM2 168 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 MFSD1Q9H3U5 465 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 NKIRAS1Q9NYS0 192 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 DEC1Q9P2X7 70 aa21.07■□□□□ 0.96
MAP1LC3A-201ENST00000360668 XIRP2A4UGR9 3374 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 C2orf81A6NN90 581 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 GOLGA8TH3BQL2 631 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 RFPL1O75677 317 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 PIGNO95427 931 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 ZNF140P52738 457 aaPredicted RBP21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 LIMK2P53671 638 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 EPHB1P54762 984 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 PDE1BQ01064 536 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 RUNX3Q13761 415 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 MPP2Q14168 576 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 NEPROQ6NW34 567 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 KIAA0408Q6ZU52 694 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 GLT6D1Q7Z4J2 308 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 LMNTD2Q8IXW0 634 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 BANPQ8N9N5 519 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 SMRP1Q8NCR6 262 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 ATXN2LQ8WWM7 1075 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 PTPRN2Q92932 1015 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 SRPK1Q96SB4 655 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 CIPCQ9C0C6 399 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 SLC8A2Q9UPR5 921 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 KCTD3Q9Y597 815 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 WASH3PC4AMC7 463 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 TIMM44O43615 452 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 SPAG7O75391 227 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 RPP40O75818 363 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 FAM107AO95990 144 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 PYGBP11216 843 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 SLC8A1P32418 973 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 CCNFP41002 786 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 SLC6A11P48066 632 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 CCNHP51946 323 aaPredicted RBP21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 PRAMEP78395 509 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 GRM2Q14416 872 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 PARM1Q6UWI2 310 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 C2CD4AQ8NCU7 369 aaPredicted RBP21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 MDGA1Q8NFP4 955 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 FRS2Q8WU20 508 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 CYB5D2Q8WUJ1 264 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 HDAC10Q969S8 669 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 VOPP1Q96AW1 172 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 SGSM3Q96HU1 749 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 DNAJC1Q96KC8 554 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 KXD1Q9BQD3 176 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 MAGEE1Q9HCI5 957 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 PRDM6Q9NQX0 595 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 NLE1Q9NVX2 485 aaPredicted RBP21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 ELOVL2Q9NXB9 296 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 GGT7Q9UJ14 662 aa21.06■□□□□ 0.96
MAP1LC3A-201ENST00000360668 COL4A3Q01955 1670 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 GKP32189 559 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 RECQLP46063 649 aaPredicted RBP21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 ARSDP51689 593 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 PPARDQ03181 441 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 EIF4HQ15056 248 aaKnown RBP21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 DPY19L3Q6ZPD9 716 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 Q6ZVU0 165 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 MTSS1LQ765P7 747 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 ANKRD42Q8N9B4 389 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 ACMSDQ8TDX5 336 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 DENND1AQ8TEH3 1009 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 SORCS1Q8WY21 1168 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 FGF14Q92915 247 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 ZNF641Q96N77 438 aaPredicted RBP21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 CCT8L2Q96SF2 557 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 KLF6Q99612 283 aaPredicted RBP21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 MKS1Q9NXB0 559 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 EPS15L1Q9UBC2 864 aa21.05■□□□□ 0.96
MAP1LC3A-201ENST00000360668 KIAA1549LQ6ZVL6 1849 aa21.04■□□□□ 0.96
MAP1LC3A-201ENST00000360668 A0A1W2PQ67 120 aa21.04■□□□□ 0.96
MAP1LC3A-201ENST00000360668 GOLGA8RI6L899 631 aa21.04■□□□□ 0.96
MAP1LC3A-201ENST00000360668 ZWINTO95229 277 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms