RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 TUSC3Q13454 348 aa9.99□□□□□ -0.81
SIN3A-201ENST00000360439 GALNTL6Q49A17 601 aa9.99□□□□□ -0.81
SIN3A-201ENST00000360439 ADGRD1Q6QNK2 874 aa9.99□□□□□ -0.81
SIN3A-201ENST00000360439 GPAMQ9HCL2 828 aa9.99□□□□□ -0.81
SIN3A-201ENST00000360439 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.99□□□□□ -0.81
SIN3A-201ENST00000360439 ZNF254O75437 659 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 C22orf31O95567 290 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 POU2F1P14859 743 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 SPRP35270 261 aaPredicted RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 SLC11A2P49281 568 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 TKTL1P51854 596 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 CDH18Q13634 790 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 ZNF235Q14590 738 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 NEDD8Q15843 81 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 ANKS3Q6ZW76 656 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 OTOAQ7RTW8 1153 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 ZDHHC17Q8IUH5 632 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 ANKRD53Q8N9V6 530 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 UPF3AQ9H1J1 476 aaKnown RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 FAM124BQ9H5Z6 455 aaPredicted RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 BFARQ9NZS9 450 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 F8W8V4 182 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 H0Y626 953 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 M0QYT0 321 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 DNAJB5O75953 348 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 USP1O94782 785 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 KDELR1P24390 212 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 DNAJB1P25685 340 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 OR1D2P34982 312 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 PRKAA2P54646 552 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 CD83Q01151 205 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 DPYSL3Q14195 570 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 SMTNL2Q2TAL5 461 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 C5orf22Q49AR2 442 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 DCLRE1AQ6PJP8 1040 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 BNIPLQ7Z465 357 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 SLC2A14Q8TDB8 520 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 BSNDQ8WZ55 320 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 MFSD1Q9H3U5 465 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 MRPS23Q9Y3D9 190 aaKnown RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 PDPK1O15530 556 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 HEXBP07686 556 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 GRM5P41594 1212 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 GPD2P43304 727 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 NR4A2P43354 598 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 PCP4P48539 62 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 NR2C2P49116 596 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 TAS2R40P59535 323 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 ERVK-8P63133 956 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 SPRED3Q2MJR0 410 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 TAPT1Q6NXT6 567 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 GALNT18Q6P9A2 607 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 RALGPS2Q86X27 583 aaPredicted RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 PLD3Q8IV08 490 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 Q8N9G6 341 aaPredicted RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 SLC4A11Q8NBS3 891 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 PSMA8Q8TAA3 256 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 PABPC5Q96DU9 382 aaKnown RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 IFT43Q96FT9 208 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 SYT11Q9BT88 431 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 KIF17Q9P2E2 1029 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 SLC27A5Q9Y2P5 690 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 BHMG1C9JSJ3 638 aaPredicted RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 GPC4O75487 556 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 CNMDO75829 334 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 OAS1P00973 400 aaKnown RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 POLBP06746 335 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 CKBP12277 381 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 ELK3P41970 407 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 FOLH1Q04609 750 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 POU5F1BQ06416 359 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 SSX2Q16385 188 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 CCDC58Q4VC31 144 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 KHDC1Q4VXA5 237 aaKnown RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 ERICH5Q6P6B1 374 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 RAB44Q7Z6P3 723 aaPredicted RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 PRUNE1Q86TP1 453 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 NPAS4Q8IUM7 802 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 FNIP1Q8TF40 1166 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 PYDC1Q8WXC3 89 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 PIK3R3Q92569 461 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 RPRD1AQ96P16 312 aaPredicted RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 KLF6Q99612 283 aaPredicted RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 FSD1LQ9BXM9 530 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 DENND2DQ9H6A0 471 aaPredicted RBP9.98□□□□□ -0.81
SIN3A-201ENST00000360439 LRRC4CQ9HCJ2 640 aa9.98□□□□□ -0.81
SIN3A-201ENST00000360439 F2P00734 622 aa9.97□□□□□ -0.81
SIN3A-201ENST00000360439 TP53P04637 393 aaPredicted RBP9.97□□□□□ -0.81
SIN3A-201ENST00000360439 CSF2RAP15509 400 aa9.97□□□□□ -0.81
SIN3A-201ENST00000360439 CDK18Q07002 472 aa9.97□□□□□ -0.81
SIN3A-201ENST00000360439 NADK2Q4G0N4 442 aa9.97□□□□□ -0.81
SIN3A-201ENST00000360439 RNASEH2BQ5TBB1 312 aaKnown RBP9.97□□□□□ -0.81
SIN3A-201ENST00000360439 GPR107Q5VW38 600 aa9.97□□□□□ -0.81
SIN3A-201ENST00000360439 KIAA1958Q8N8K9 716 aa9.97□□□□□ -0.81
SIN3A-201ENST00000360439 NIPA2Q8N8Q9 360 aa9.97□□□□□ -0.81
SIN3A-201ENST00000360439 TSPAN14Q8NG11 270 aa9.97□□□□□ -0.81
SIN3A-201ENST00000360439 LMO3Q8TAP4 145 aa9.97□□□□□ -0.81
SIN3A-201ENST00000360439 ST8SIA2Q92186 375 aa9.97□□□□□ -0.81
SIN3A-201ENST00000360439 C18orf25Q96B23 403 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms