RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TMC3Q7Z5M5 1100 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 TCF12Q99081 682 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 RIIAD1A6NNX1 92 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 ABRAXAS1Q6UWZ7 409 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 ATG14Q6ZNE5 492 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 KBTBD7Q8WVZ9 684 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 MDM4O15151 490 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 SCN2BO60939 215 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 ATG13O75143 517 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 UGT2B11O75310 529 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 CYP3A4P08684 503 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 GLUD2P49448 558 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 CDH4P55283 916 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 NET1Q7Z628 596 aaPredicted RBP9.71□□□□□ -0.85
CUX1-203ENST00000360264 MNTQ99583 582 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 SEMA3CQ99985 751 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 SEZ6LQ9BYH1 1024 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 LOC100506127A0A0U1RQW1 187 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 TRBC1P01850 177 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 GLI1P08151 1106 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 CDH5P33151 784 aaPredicted RBP9.71□□□□□ -0.86
CUX1-203ENST00000360264 HSF2Q03933 536 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 RASGEF1BQ0VAM2 473 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 DENND1CQ8IV53 801 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 DAW1Q8N136 415 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 FBXL16Q8N461 479 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 SPATA9Q9BWV2 254 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.71□□□□□ -0.86
CUX1-203ENST00000360264 PUDPQ08623 228 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 PARP15Q460N3 678 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 OLFML2AQ68BL7 652 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 NMD3Q96D46 503 aaKnown RBP9.71□□□□□ -0.86
CUX1-203ENST00000360264 COPS8Q99627 209 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 STOML2Q9UJZ1 356 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 CAPN6Q9Y6Q1 641 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 C5orf60A6NFR6 353 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 LPOP22079 712 aaPredicted RBP9.71□□□□□ -0.86
CUX1-203ENST00000360264 PUS10Q3MIT2 529 aaKnown RBP9.71□□□□□ -0.86
CUX1-203ENST00000360264 TMEM192Q8IY95 271 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 RSPH9Q9H1X1 276 aaPredicted RBP9.71□□□□□ -0.86
CUX1-203ENST00000360264 SNX7Q9UNH6 387 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 ABHD2P08910 425 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 SMIM10L2AP0DMW4 78 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 SMIM10L2BP0DMW5 78 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 LY6KQ17RY6 165 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 RIOX2Q8IUF8 465 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 SAMD14Q8IZD0 417 aaPredicted RBP9.71□□□□□ -0.86
CUX1-203ENST00000360264 RBFAQ8N0V3 343 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 PIWIL2Q8TC59 973 aaKnown RBP9.71□□□□□ -0.86
CUX1-203ENST00000360264 ADAM2Q99965 735 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 SLC35C2Q9NQQ7 365 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 FKBP14Q9NWM8 211 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 UBOX5O94941 541 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 ELFN1P0C7U0 828 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 APTXQ7Z2E3 356 aaKnown RBP9.71□□□□□ -0.86
CUX1-203ENST00000360264 IFNLR1Q8IU57 520 aaPredicted RBP9.71□□□□□ -0.86
CUX1-203ENST00000360264 OR52E6Q96RD3 313 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 FERD3LQ96RJ6 166 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 FAM124BQ9H5Z6 455 aaPredicted RBP9.71□□□□□ -0.86
CUX1-203ENST00000360264 ASB8Q9H765 288 aa9.71□□□□□ -0.86
CUX1-203ENST00000360264 SEMA4BQ9NPR2 832 aaPredicted RBP9.71□□□□□ -0.86
CUX1-203ENST00000360264 LARS2Q15031 903 aaKnown RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 ZCCHC12Q6PEW1 402 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 PTGR2Q8N8N7 351 aaPredicted RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 FBXO25Q8TCJ0 367 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 MAGEE2Q8TD90 523 aaPredicted RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 PGM2Q96G03 612 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 HCN3Q9P1Z3 774 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 NR2F6P10588 404 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 KCNF1Q9H3M0 494 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 CAB39LQ9H9S4 337 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 TOR4AQ9NXH8 423 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 ANKRD23Q86SG2 305 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 SRFBP1Q8NEF9 429 aaKnown RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 ZNF398Q8TD17 642 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 MTMR9Q96QG7 549 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 PRMT5O14744 637 aaPredicted RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 SERPINA6P08185 405 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 NR4A1P22736 598 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 PRKAG1P54619 331 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 CAPN13Q6MZZ7 669 aaPredicted RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 FBXO22Q8NEZ5 403 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 PDCD2LQ9BRP1 358 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 MIR1-1HGQ9H1L0 117 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 IKZF3Q9UKT9 509 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 GNEQ9Y223 722 aaKnown RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 RSL1D1O76021 490 aaKnown RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 NTRK1P04629 796 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 CLUP10909 449 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 LAPTM5Q13571 262 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 NCANO14594 1321 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 H3BUI4 141 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 CLDN4O14493 209 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 IL12AP29459 219 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 MIIPQ5JXC2 388 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 MAP4K3Q8IVH8 894 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 DEFB106AQ8N104 65 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 FIBCD1Q8N539 461 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 PSMA8Q8TAA3 256 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 CRISPLD1Q9H336 500 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms