RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 CFAP61Q8NHU2 1237 aa18.37■□□□□ 0.53
PDLIM7-203ENST00000359895 DNAJC1Q96KC8 554 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-203ENST00000359895 TBATAQ96M53 351 aa18.37■□□□□ 0.53
PDLIM7-203ENST00000359895 NDNQ99608 321 aa18.37■□□□□ 0.53
PDLIM7-203ENST00000359895 MUC3BQ9H195 1237 aa18.37■□□□□ 0.53
PDLIM7-203ENST00000359895 GPAMQ9HCL2 828 aa18.37■□□□□ 0.53
PDLIM7-203ENST00000359895 TRPC7Q9HCX4 862 aa18.37■□□□□ 0.53
PDLIM7-203ENST00000359895 KCTD3Q9Y597 815 aa18.37■□□□□ 0.53
PDLIM7-203ENST00000359895 CBX4O00257 560 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 MATN2O00339 956 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 HDAC3O15379 428 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 TSPAN3O60637 253 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 GJB3O75712 270 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 PIGNO95427 931 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 GOT2P00505 430 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 PRDX6P30041 224 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 SCNN1BP51168 640 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 DEFB103AP81534 67 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 PFKPQ01813 784 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 USP4Q13107 963 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 CSHL1Q14406 222 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 CYTH1Q15438 398 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 TAF1AQ15573 450 aaPredicted RBP18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 WLSQ5T9L3 541 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 SEL1L3Q68CR1 1132 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 CXorf57Q6NSI4 855 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 PIWIL4Q7Z3Z4 852 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 HJURPQ8NCD3 748 aaPredicted RBP18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 UBXN10Q96LJ8 280 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 POPDC3Q9HBV1 291 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 CATSPERZQ9NTU4 200 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 NLE1Q9NVX2 485 aaPredicted RBP18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 NCKIPSDQ9NZQ3 722 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 SSX2IPQ9Y2D8 614 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 ASB3Q9Y575 518 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 ARL5AQ9Y689 179 aa18.36■□□□□ 0.53
PDLIM7-203ENST00000359895 CCDC162PA2VCL2 907 aa18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 F11P03951 625 aa18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 GLDCP23378 1020 aa18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 PSMA3P25788 255 aa18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 PGM1P36871 562 aa18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 PGGT1BP53609 377 aa18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 SMAD3P84022 425 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 KDSRQ06136 332 aa18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 PREPLQ4J6C6 727 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 ARL13AQ5H913 290 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 FAM117BQ6P1L5 589 aa18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 OR4L1Q8NH43 312 aa18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 RMDN1Q96DB5 314 aa18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 CNDP1Q96KN2 507 aa18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 TDRD1Q9BXT4 1180 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 DENND2DQ9H6A0 471 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 RNPEPL1Q9HAU8 725 aa18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 INTS10Q9NVR2 710 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 NOP53Q9NZM5 478 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 MARCH4Q9P2E8 410 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 KIAA0100Q14667 2235 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-203ENST00000359895 PEX11AO75192 247 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 WISP3O95389 354 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 OLFM2O95897 454 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 C1RP00736 705 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 CHRNGP07510 517 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 CCDC166P0CW27 439 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 MPSTP25325 297 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 RGRP47804 291 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 CPA2P48052 419 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 RAP1GDS1P52306 607 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 WDR5P61964 334 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 RALGPS1Q5JS13 557 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 C16orf59Q7L2K0 433 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 TMEM150AQ86TG1 271 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 SLC22A9Q8IVM8 553 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 RBM15BQ8NDT2 890 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 WBP2Q969T9 261 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 CMTM5Q96DZ9 223 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 ZFRQ96KR1 1074 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 ADGRE3Q9BY15 652 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 POMKQ9H5K3 350 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 TCF7L2Q9NQB0 619 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 ACTL7AQ9Y615 435 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 PTPRSQ13332 1948 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 OR51F1A6NGY5 319 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 C2orf81A6NN90 581 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 F8W8V4 182 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 H0Y626 953 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 CCL22O00626 93 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 TBL1XO60907 577 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 TIMP1P01033 207 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 NCF2P19878 526 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 FDXRP22570 491 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 NUMBP49757 651 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 ZNF140P52738 457 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 MXRA7P84157 204 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 E2F5Q15329 346 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 TYSND1Q2T9J0 566 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 INO80DQ53TQ3 878 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 VWA5B1Q5TIE3 1220 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 AFTPHQ6ULP2 937 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 ACAD11Q709F0 780 aa18.34■□□□□ 0.53
PDLIM7-203ENST00000359895 KIRREL3Q8IZU9 778 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms